RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ZNF417Q8TAU3 575 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 SLC38A4Q969I6 547 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 VPS33AQ96AX1 596 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 ITCHQ96J02 903 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF587Q96SQ5 575 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-219ENST00000530495 RSPO3Q9BXY4 272 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-219ENST00000530495 METTL17Q9H7H0 456 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-219ENST00000530495 RMND5AQ9H871 391 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 RPS6KB2Q9UBS0 482 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 IGKV1D-42A0A075B6H8 117 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 TRAV36DV7A0A075B6V5 113 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 SEC14L2O76054 403 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 HPXP02790 462 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 CD79AP11912 226 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 ACHEP22303 614 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 GRPRP30550 384 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 GPR6P46095 362 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-219ENST00000530495 TMEM33P57088 247 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 PIGFQ07326 219 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 RGNQ15493 299 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 FXNQ16595 210 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 TRMT5Q32P41 509 aaKnown RBP12.83□□□□□ -0.36
CAPN1-219ENST00000530495 GTDC1Q4AE62 458 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 TNFAIP8L3Q5GJ75 292 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 MSANTD1Q6ZTZ1 278 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 CARM1Q86X55 608 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 UEVLDQ8IX04 471 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 MREGQ8N565 214 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 OR6S1Q8NH40 331 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 DNAJA4Q8WW22 397 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-219ENST00000530495 RDH5Q92781 318 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 TMEM186Q96B77 213 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 SLC41A3Q96GZ6 507 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 DENND2DQ9H6A0 471 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-219ENST00000530495 KCNK9Q9NPC2 374 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 A4GALTQ9NPC4 353 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 SDR39U1Q9NRG7 319 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-219ENST00000530495 HIF1ANQ9NWT6 349 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 NOX1Q9Y5S8 564 aa12.83□□□□□ -0.36
CAPN1-219ENST00000530495 A0A1B0GWA3 101 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 FAM157AC9JC47 383 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 HPRP00739 348 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 TFP02787 698 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 MSMBP08118 114 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 NUDT7P0C024 238 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 BMP2P12643 396 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 HLA-DOBP13765 273 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 ETS2P15036 469 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 CBLP22681 906 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 HTR2AP28223 471 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 COMPP49747 757 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-219ENST00000530495 SEC24CP53992 1094 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 MRPS11P82912 194 aaKnown RBP12.82□□□□□ -0.36
CAPN1-219ENST00000530495 MFSD13AQ14CX5 517 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 CARD17Q5XLA6 110 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 REP15Q6BDI9 236 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 WDR93Q6P2C0 686 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 ULK3Q6PHR2 472 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF813Q6ZN06 617 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 BBS10Q8TAM1 723 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 MAL2Q969L2 176 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 MAELQ96JY0 434 aaKnown RBP12.82□□□□□ -0.36
CAPN1-219ENST00000530495 PAIP2Q9BPZ3 127 aaKnown RBP12.82□□□□□ -0.36
CAPN1-219ENST00000530495 EMC6Q9BV81 110 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 B3GAT2Q9NPZ5 323 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 THAP1Q9NVV9 213 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF224Q9NZL3 707 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 ZIM2Q9NZV7 527 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 KLHL14Q9P2G3 628 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 GRIP1Q9Y3R0 1128 aa12.82□□□□□ -0.36
CAPN1-219ENST00000530495 A0A087WUJ7 227 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 CLIC1O00299 241 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 WNT9BO14905 357 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 SPRY1O43609 319 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-219ENST00000530495 SNNO75324 88 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-219ENST00000530495 NQO1P15559 274 aaKnown RBP12.81□□□□□ -0.36
CAPN1-219ENST00000530495 TCN1P20061 433 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-219ENST00000530495 PRKAR1BP31321 381 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 POLR2JP52435 117 aaKnown RBP12.81□□□□□ -0.36
CAPN1-219ENST00000530495 AQP5P55064 265 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 RAB1AP62820 205 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 SCGB2A2Q13296 93 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 ALG10BQ5I7T1 473 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 FAM91A1Q658Y4 838 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 NXNQ6DKJ4 435 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 LRP11Q86VZ4 500 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 SCAIQ8N9R8 606 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 GTF2H4Q92759 462 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 TXNDC15Q96J42 360 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 LRRC37BQ96QE4 947 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 SYT3Q9BQG1 590 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 PAIP1Q9H074 479 aaKnown RBP12.81□□□□□ -0.36
CAPN1-219ENST00000530495 ZNF275Q9NSD4 429 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-219ENST00000530495 TREM2Q9NZC2 230 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 POFUT2Q9Y2G5 429 aa12.81□□□□□ -0.36
CAPN1-219ENST00000530495 CORINQ9Y5Q5 1042 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms