RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 UBQLN3Q9H347 655 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 GLIPR2Q9H4G4 154 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 CHMP1AQ9HD42 196 aaPredicted RBP3.49□□□□□ -1.85
C11orf54-208ENST00000530279 CHST11Q9NPF2 352 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 KRCC1Q9NPI7 259 aaPredicted RBP3.49□□□□□ -1.85
C11orf54-208ENST00000530279 POLE3Q9NRF9 147 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 SDHAF3Q9NRP4 125 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 DDX18Q9NVP1 670 aaKnown RBP3.49□□□□□ -1.85
C11orf54-208ENST00000530279 FAM120CQ9NX05 1096 aaKnown RBP3.49□□□□□ -1.85
C11orf54-208ENST00000530279 THUMPD1Q9NXG2 353 aaKnown RBP3.49□□□□□ -1.85
C11orf54-208ENST00000530279 ZDHHC2Q9UIJ5 367 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 GMEB1Q9Y692 573 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 CACNA1CQ13936 2221 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 MYO9AB2RTY4 2548 aa3.49□□□□□ -1.85
C11orf54-208ENST00000530279 A0A087WZY1 265 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 A0A1W2PQD3 144 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 A0A1W2PRB8 838 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 NPIPA5E9PKD4 350 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 UPK1AO00322 258 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 HS3ST1O14792 307 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ANKRD28O15084 1053 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ITM2AO43736 263 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 TSPAN2O60636 221 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 PEX11AO75192 247 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 PRKRAO75569 313 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 BAG2O95816 211 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ACTL6AO96019 429 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 IL6P05231 212 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 HPNP05981 417 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CT62P0C5K7 136 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ZCCHC18P0CG32 403 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CCL3P10147 92 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 GP1BBP13224 206 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 MMP9P14780 707 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CPN1P15169 458 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ARSBP15848 533 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 BGNP21810 368 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 FKBP2P26885 142 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 PTPN6P29350 595 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ARRB2P32121 409 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CASP3P42574 277 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CDK9P50750 372 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 NR0B1P51843 470 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 DIO3P55073 304 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 PPIAP62937 165 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 RPL38P63173 70 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 KCNJ2P63252 427 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CSNK2A1P68400 391 aaPredicted RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 C17orf67Q0P5P2 114 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 PLCXD2Q0VAA5 305 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 SNAPC1Q16533 368 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ZSWIM7Q19AV6 140 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 EIF2S3LQ2VIR3 472 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 TRMT12Q53H54 448 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 C10orf25Q5T742 122 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 PXDC1Q5TGL8 231 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 DCAF12L2Q5VW00 463 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 IL23RQ5VWK5 629 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 METTL21CQ5VZV1 264 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 SLC18B1Q6NT16 456 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 FAM122CQ6P4D5 195 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ENPP6Q6UWR7 440 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ZNF782Q6ZMW2 699 aaPredicted RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 DGAT2L6Q6ZPD8 337 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 SLC16A12Q6ZSM3 486 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 FAM47EQ6ZV65 393 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 SHFQ7M4L6 423 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 MTERF4Q7Z6M4 381 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CCDC190Q86UF4 302 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 NOXA1Q86UR1 476 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 HAPLN4Q86UW8 402 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 PLCZ1Q86YW0 608 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CHERPQ8IWX8 916 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CPSF7Q8N684 471 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ARFGAP2Q8N6H7 521 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 TMEM251Q8N6I4 163 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 TRIML2Q8N7C3 387 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ZNF781Q8N8C0 355 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ZNF321PQ8N8H1 164 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CSNK2A3Q8NEV1 391 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 OR7G2Q8NG99 324 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 OR10G3Q8NGC4 313 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 OR52R1Q8NGF1 315 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 OR9A2Q8NGT5 310 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 OR2T11Q8NH01 316 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 NEIL3Q8TAT5 605 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 FAM57AQ8TBR7 257 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 FAM110BQ8TC76 370 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ASB5Q8WWX0 329 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ZNF75CPQ92670 426 aaPredicted RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 HGDQ93099 445 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 VPS33AQ96AX1 596 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 EXOSC8Q96B26 276 aaKnown RBP3.48□□□□□ -1.85
C11orf54-208ENST00000530279 OMA1Q96E52 524 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 EGLN2Q96KS0 407 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 C3orf30Q96M34 536 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 ZFP3Q96NJ6 502 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 CCDC115Q96NT0 180 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 TSSK3Q96PN8 268 aa3.48□□□□□ -1.85
C11orf54-208ENST00000530279 GAL3ST4Q96RP7 486 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms