RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 GPR50Q13585 617 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 PEX6Q13608 980 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 PON2Q15165 354 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 GLYR1Q49A26 553 aaPredicted RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 FKBP1CQ5VVH2 108 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 SLX4IPQ5VYV7 408 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 TWF2Q6IBS0 349 aaKnown RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 SLC8B1Q6J4K2 584 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 APOBEC3HQ6NTF7 200 aaKnown RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 TMEM184AQ6ZMB5 413 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 Q6ZVQ6 151 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 SLC35D2Q76EJ3 337 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 DCXRQ7Z4W1 244 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 ABHD12BQ7Z5M8 362 aaPredicted RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 PLCZ1Q86YW0 608 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 C8orf31Q8N9H6 132 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 MLKLQ8NB16 471 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 ICA1LQ8NDH6 482 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 MYLPFQ96A32 169 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 ECHDC3Q96DC8 303 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 GLT1D1Q96MS3 346 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 TSG101Q99816 390 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 PELOQ9BRX2 385 aaKnown RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 TTYH2Q9BSA4 534 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 NLNQ9BYT8 704 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 OPN3Q9H1Y3 402 aaPredicted RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 MRM3Q9HC36 420 aaKnown RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 POLD4Q9HCU8 107 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 NT5MQ9NPB1 228 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 FKBP14Q9NWM8 211 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 CLEC5AQ9NY25 188 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 PTTG3PQ9NZH4 202 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 DCDC2Q9UHG0 476 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 SLC7A8Q9UHI5 535 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 ZNF229Q9UJW7 825 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 IKZF2Q9UKS7 526 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 STARD10Q9Y365 291 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 MRPS18CQ9Y3D5 142 aaKnown RBP4.7□□□□□ -1.66
PCF11-202ENST00000528336 ZNF175Q9Y473 711 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 NOTCH3Q9UM47 2321 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 AKAP11Q9UKA4 1901 aa4.7□□□□□ -1.66
PCF11-202ENST00000528336 RFX7Q2KHR2 1363 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ADAMTSL1Q8N6G6 1762 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 KCNE1BA0A087WTH5 132 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 MGAT4DA6NG13 374 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 YJEFN3A6XGL0 299 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 A8MXQ7 604 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 E7ENQ6 273 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 H0YHG0 523 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 OR7A17O14581 309 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 SCAMP2O15127 329 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 COCHO43405 550 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ZNF189O75820 626 aaPredicted RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 BRI3O95415 125 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 CLDN9O95484 217 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 IGHV3-13P01766 116 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 PIGRP01833 764 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ALOX5P09917 674 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 EZRP15311 586 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 BTDP43251 543 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 NPBWR2P48146 333 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 EFNB2P52799 333 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ACLYP53396 1101 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ATP5J2P56134 94 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 PRPS1P60891 318 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 FKBP3Q00688 224 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 OGDHQ02218 1023 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 C1orf61Q13536 156 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ZNF146Q15072 292 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ZNF699Q32M78 642 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 CDKL4Q5MAI5 379 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 LGSNQ5TDP6 509 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 MFSD14CQ5VZR4 134 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 RTL6Q6ICC9 239 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 CWC27Q6UX04 472 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 DPY19L2P2Q6ZN68 376 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 APOBEC3FQ8IUX4 373 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 OR4N5Q8IXE1 308 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ABHD12Q8N2K0 398 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 PARP8Q8N3A8 854 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 TMEM104Q8NE00 496 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 HTR3CQ8WXA8 447 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 NAT6Q93015 286 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 DCPSQ96C86 337 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 C8orf44Q96CB5 159 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 C12orf42Q96LP6 360 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 ZNF597Q96LX8 424 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 IL4I1Q96RQ9 567 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 SLC30A2Q9BRI3 323 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 CHCHD5Q9BSY4 110 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 DPH7Q9BTV6 452 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 DUSP16Q9BY84 665 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 UPF3BQ9BZI7 483 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 IL1RAPQ9NPH3 570 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 RPS10P5Q9NQ39 176 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 DYRK4Q9NR20 520 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 TECRQ9NZ01 308 aaKnown RBP4.69□□□□□ -1.66
PCF11-202ENST00000528336 IL37Q9NZH6 218 aa4.69□□□□□ -1.66
PCF11-202ENST00000528336 CTSZQ9UBR2 303 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms