RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	SHC1	P29353	583 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	UQCRC1	P31930	480 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	GRK5	P34947	590 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	AQP2	P41181	271 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	PTDSS1	P48651	473 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	BLVRA	P53004	296 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	SUCLG1	P53597	346 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	CRISP1	P54107	249 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	MLLT10	P55197	1068 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	SH3BGR	P55822	239 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	CLRN1	P58418	232 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	RPL27	P61353	136 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	MYBPC1	Q00872	1141 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	POU3F1	Q03052	451 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	TLE1	Q04724	770 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	LGALS3BP	Q08380	585 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	PPP1R8	Q12972	351 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	NPRL3	Q12980	569 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	KEAP1	Q14145	624 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	SLC17A1	Q14916	467 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	LAPTM4A	Q15012	233 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	STK11	Q15831	433 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	LRRC36	Q1X8D7	754 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	PGGHG	Q32M88	737 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	SLC36A3	Q495N2	470 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	PRR30	Q53SZ7	412 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	C1QTNF12	Q5T7M4	302 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	C1QL3	Q5VWW1	255 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	KLHL17	Q6TDP4	642 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	RPTN	Q6XPR3	784 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	SLC35D2	Q76EJ3	337 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	FAM214B	Q7L5A3	538 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	SSX8	Q7RTT4	187 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	AAED1	Q7RTV5	226 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	TMEM179B	Q7Z7N9	219 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ADGRE4P	Q86SQ3	457 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	EPHX4	Q8IUS5	362 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ZNF100	Q8IYN0	542 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	DHRSX	Q8N5I4	330 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	TMEM99	Q8N816	258 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	POMGNT2	Q8NAT1	580 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	PLPP7	Q8NBV4	271 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	OR9K2	Q8NGE7	335 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	OR5M9	Q8NGP3	310 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	OR6K3	Q8NGY3	331 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	OR6X1	Q8NH79	312 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	FNDC9	Q8TBE3	224 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	TRUB1	Q8WWH5	349 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ROBO4	Q8WZ75	1007 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ZNF566	Q969W8	418 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	APH1A	Q96BI3	265 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ZNF524	Q96C55	264 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ZNF845	Q96IR2	970 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	MOGAT1	Q96PD6	335 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	BBC3	Q96PG8	261 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ERMAP	Q96PL5	475 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	RBP7	Q96R05	134 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	TNFRSF13C	Q96RJ3	184 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	MYCBP	Q99417	103 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	NIPSNAP1	Q9BPW8	284 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	USB1	Q9BQ65	265 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	ALG12	Q9BV10	488 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	KATNB1	Q9BVA0	655 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	TSSK6	Q9BXA6	273 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	SRXN1	Q9BYN0	137 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	FN3K	Q9H479	309 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	RIBC2	Q9H4K1	309 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	MCCC2	Q9HCC0	563 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	MOV10	Q9HCE1	1003 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	NRIP3	Q9NQ35	241 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	TAS2R5	Q9NYW4	299 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	PLA2G2E	Q9NZK7	142 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	GMPPB	Q9Y5P6	360 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	HSPE1-MOB4	S4R3N1	261 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	DNAJC13	O75165	2243 aa		4.68	□□□□□ -1.66
PUM1-216	ENST00000525997	FREM3	P0C091	2139 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	PCNX3	Q9H6A9	2034 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	ZNF716	A6NP11	495 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	ZAR1L	A6NP61	321 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	ZNF587B	E7ETH6	402 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	LRRN3	E7EW58	273 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997		H0YC42	278 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	CCL21	O00585	134 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	SOCS2	O14508	198 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	TRAF3IP2	O43734	574 aa	Predicted RBP	4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	PTP4A3	O75365	173 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	SERPINI2	O75830	405 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	SOX14	O95416	240 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	PPP1R3D	O95685	299 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	TXNDC12	O95881	172 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	F13B	P05160	661 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	IFNGR1	P15260	489 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	ZNF26	P17031	533 aa	Predicted RBP	4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	AGA	P20933	346 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	CTSS	P25774	331 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	CRABP1	P29762	137 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	AGTR1	P30556	359 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	CHRNB4	P30926	498 aa		4.67	□□□□□ -1.66
PUM1-216	ENST00000525997	HOXC12	P31275	282 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms