RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 POLR2J3Q9H1A7 115 aaKnown RBP15.64■□□□□ 0.09
CLK4-211ENST00000522556 ZNF229Q9UJW7 825 aa15.64■□□□□ 0.09
CLK4-211ENST00000522556 RNF115Q9Y4L5 304 aa15.64■□□□□ 0.09
CLK4-211ENST00000522556 ZNF503-AS2A6NEH8 195 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 SHISA9B4DS77 424 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 hCG_2039718K7EN88 272 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 M0R3G1 203 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 NDUFAB1O14561 156 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 ARPC2O15144 300 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 SLC43A1O75387 559 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 RBM34P42696 430 aaKnown RBP15.63■□□□□ 0.09
CLK4-211ENST00000522556 NR1H2P55055 460 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 BIDP55957 195 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 MXRA7P84157 204 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 VLDLRP98155 873 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 RPL18Q07020 188 aaKnown RBP15.63■□□□□ 0.09
CLK4-211ENST00000522556 ACKR1Q16570 336 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 CEACAM16Q2WEN9 425 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 DEFB113Q30KQ7 82 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 TBRG1Q3YBR2 411 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 TBPL2Q6SJ96 375 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 NANOGNBQ7Z5D8 188 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 PXKQ7Z7A4 578 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 KRTAP1-3Q8IUG1 177 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 C20orf196Q8IYI0 205 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 C1orf162Q8NEQ5 155 aaPredicted RBP15.63■□□□□ 0.09
CLK4-211ENST00000522556 BCL2L2Q92843 193 aaPredicted RBP15.63■□□□□ 0.09
CLK4-211ENST00000522556 MUCL1Q96DR8 90 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 SGTBQ96EQ0 304 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 GPR35Q9HC97 309 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 DCAF13Q9NV06 445 aaKnown RBP15.63■□□□□ 0.09
CLK4-211ENST00000522556 NOX1Q9Y5S8 564 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 ENPP4Q9Y6X5 453 aa15.63■□□□□ 0.09
CLK4-211ENST00000522556 B2RBV5 119 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 BLOC1S5-TXNDC5H3BN57 136 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 M0R1B8 84 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 ABCD4O14678 606 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 F13BP05160 661 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 CD3EP07766 207 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 THRBP10828 461 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 MAKP20794 623 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 AQP2P41181 271 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 ARF1P84077 181 aaKnown RBP15.62■□□□□ 0.09
CLK4-211ENST00000522556 RUNX1T1Q06455 604 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 ST3GAL3Q11203 375 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 IQCCQ4KMZ1 466 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 OR7E24Q6IFN5 339 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 B3GLCTQ6Y288 498 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 SLC35D2Q76EJ3 337 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 P2RY8Q86VZ1 359 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 NRMQ8IXM6 262 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 IGFBPL1Q8WX77 278 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 C7orf34Q96L11 122 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 FOXC2Q99958 501 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 CXXC4Q9H2H0 198 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 ESRP2Q9H6T0 727 aaKnown RBP15.62■□□□□ 0.09
CLK4-211ENST00000522556 SEC61A2Q9H9S3 476 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 CRLF2Q9HC73 371 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 NDUFAF4Q9P032 175 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 MED31Q9Y3C7 131 aa15.62■□□□□ 0.09
CLK4-211ENST00000522556 A0A087WUU8 490 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 HS3ST1O14792 307 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 RNF13O43567 381 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 SEMG1P04279 462 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 IFI30P13284 250 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 ATP6V1B2P21281 511 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 ZP4Q12836 540 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 SAMD4BQ5PRF9 694 aaKnown RBP15.61■□□□□ 0.09
CLK4-211ENST00000522556 HMBOX1Q6NT76 420 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 C16orf89Q6UX73 402 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 MYPOPQ86VE0 399 aaPredicted RBP15.61■□□□□ 0.09
CLK4-211ENST00000522556 GPR137CQ8N3F9 429 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 C17orf78Q8N4C9 275 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 PIK3C3Q8NEB9 887 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 HTRA1Q92743 480 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 MBD6Q96DN6 1003 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 NSL1Q96IY1 281 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 USB1Q9BQ65 265 aaKnown RBP15.61■□□□□ 0.09
CLK4-211ENST00000522556 FNDC11Q9BVV2 318 aa15.61■□□□□ 0.09
CLK4-211ENST00000522556 F8P00451 2351 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 RPL36A-HNRNPH2H7BZ11 118 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 PDE5AO76074 875 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 OR6A2O95222 327 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 CD40P25942 277 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 GPR4P46093 362 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 TGFBR3Q03167 851 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 FHL1Q13642 323 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 LAPTM4AQ15012 233 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 TRAM2Q15035 370 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 IGFN1Q86VF2 1251 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 PIAS4Q8N2W9 510 aaPredicted RBP15.6■□□□□ 0.09
CLK4-211ENST00000522556 ANKK1Q8NFD2 765 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 OR13C2Q8NGS9 318 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 CCL19Q99731 98 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 GORASP2Q9H8Y8 452 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 NMNAT1Q9HAN9 279 aaPredicted RBP15.6■□□□□ 0.09
CLK4-211ENST00000522556 NOX3Q9HBY0 568 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 NGBQ9NPG2 151 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 MAGEL2Q9UJ55 1249 aa15.6■□□□□ 0.09
CLK4-211ENST00000522556 RPS6KA6Q9UK32 745 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms