RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 THUMPD1Q9NXG2 353 aaKnown RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 RSPH14Q9UHP6 348 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF256Q9Y2P7 627 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 FLVCR1Q9Y5Y0 555 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 PPIP5K1Q6PFW1 1433 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ATRXP46100 2492 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 MYH7P12883 1935 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 CHD4Q14839 1912 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 MED1Q15648 1581 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ANKRD36BQ8N2N9 1353 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF142P52746 1687 aaPredicted RBP2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIF1AQ12756 1690 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 CAMTA1Q9Y6Y1 1673 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 WDR19Q8NEZ3 1342 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 LAMB4A4D0S4 1761 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIR2DL5BA0A0G2JN68 375 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIR2DL5BA0A0G2JPC4 375 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR5B21A6NL26 309 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 LOC110117498-PIK3R3F6TDL0 507 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 POLR2DO15514 142 aaKnown RBP2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 CIB2O75838 187 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR2F2O95006 317 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KRT6AP02538 564 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 MMP1P03956 469 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 RBMY1CP0DJD4 496 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 CCNCP24863 283 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 HOXD10P28358 340 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 FDFT1P37268 417 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIR2DS4P43632 304 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 BCL2L1Q07817 233 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 TGM3Q08188 693 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIAA0040Q15053 153 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 C1orf185Q5T7R7 199 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 TMEM107Q6UX40 140 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 DNM1P46Q6ZS02 220 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 PGAP1Q75T13 922 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 NIPA1Q7RTP0 329 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 BIVMQ86UB2 503 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 FBXO16Q8IX29 292 aaPredicted RBP2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIR2DL5AQ8N109 375 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 FBXL16Q8N461 479 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR2L2Q8NH16 312 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KIR2DL5BQ8NHK3 375 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 PLPPR1Q8TBJ4 325 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 MAIP1Q8WWC4 291 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 FGGYQ96C11 551 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 CMTM7Q96FZ5 175 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 MS4A4EQ96PG1 132 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 PANX1Q96RD7 426 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 CLCC1Q96S66 551 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 GAL3ST1Q99999 423 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 MAPKAP1Q9BPZ7 522 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 RPS10P5Q9NQ39 176 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 INPP5EQ9NRR6 644 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 DDX18Q9NVP1 670 aaKnown RBP2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 RAB20Q9NX57 234 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 KLHL28Q9NXS3 571 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 SLC2A8Q9NY64 477 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 DCDC2Q9UHG0 476 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 PLLPQ9Y342 182 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 UGT2A1Q9Y4X1 527 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 FAM135BQ49AJ0 1406 aa2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 CEP170BQ9Y4F5 1589 aaPredicted RBP2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 PHF3Q92576 2039 aaKnown RBP2.47□□□□□ -2.01
HMGN1P28-201ENST00000521340 CASZ1Q86V15 1759 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 RGPD5Q99666 1765 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 CDHR2Q9BYE9 1310 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 MAPK8IP3Q9UPT6 1336 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 YTHDC2Q9H6S0 1430 aaKnown RBP2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 TCP11X1B4DZS4 312 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 MBTPS2O43462 519 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 AGTP01019 485 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 HSPB1P04792 205 aaKnown RBP2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 UBTFL1P0CB47 393 aaPredicted RBP2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 CCDC130P13994 396 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 CXCR2P25025 360 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 RFC4P35249 363 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 UGT1A3P35503 534 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 YAP1P46937 504 aaKnown RBP2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 GSSP48637 474 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 KLK7P49862 253 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 SLC26A2P50443 739 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 PLK1P53350 603 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 SCRN3Q0VDG4 424 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 ASPHQ12797 758 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 GNMTQ14749 295 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 GPNMBQ14956 572 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 WDR43Q15061 677 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 IMMTQ16891 758 aaKnown RBP2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 LY6G6FQ5SQ64 297 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 CASC10Q5T4H9 136 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 CARD17Q5XLA6 110 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 ASCL5Q7RTU5 278 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 TGIF2LXQ8IUE1 241 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 SLC39A11Q8N1S5 342 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 OR7G2Q8NG99 324 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 ZNF564Q8TBZ8 553 aaPredicted RBP2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 FGF11Q92914 225 aa2.46□□□□□ -2.02
HMGN1P28-201ENST00000521340 CXorf40BQ96DE9 158 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms