RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CHST2Q9Y4C5 530 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 USH1CQ9Y6N9 552 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 ATRQ13535 2644 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 ZANQ9Y493 2812 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 IGHV4-30-2A0A087WSY4 118 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 TCRBV5S2A0A599 114 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 AQP7P3A6NL99 342 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 M0R1B8 84 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 TLX2O43763 284 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 NPIPB7O75200 414 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 DCTN3O75935 186 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 AKR7A3O95154 331 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 GPIP06744 558 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 KITP10721 976 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 ETFAP13804 333 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 UQCRBP14927 111 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 MPGP29372 298 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 FABP6P51161 128 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 RPS6KA3P51812 740 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 SCAND1P57086 179 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC25A3Q00325 362 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 TGFBR3Q03167 851 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 OR7A5Q15622 319 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 NRF1Q16656 503 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 ZSWIM7Q19AV6 140 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 GTDC1Q4AE62 458 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC9B1Q4ZJI4 515 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 LIN52Q52LA3 116 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 OTUD3Q5T2D3 398 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 C9orf135Q5VTT2 229 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 NXNQ6DKJ4 435 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 WBP2NLQ6ICG8 309 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 ZNF544Q6NX49 715 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 ZNF836Q6ZNA1 936 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 AAED1Q7RTV5 226 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 FBXL14Q8N1E6 418 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 MUC15Q8N387 334 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 THOC1Q96FV9 657 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 ZNF385AQ96PM9 386 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 RHNO1Q9BSD3 238 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 TPT1P8Q9HAU6 139 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 SDR39U1Q9NRG7 319 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 YAE1D1Q9NRH1 226 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 CALML5Q9NZT1 146 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 P2RX2Q9UBL9 471 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 POU2F3Q9UKI9 436 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 AMDHD2Q9Y303 409 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 HEATR5AQ86XA9 2040 aa8.1□□□□□ -1.11
CTNNA1-221ENST00000520339 A0A0G2JND7 137 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 A8MVM7 634 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 GPRIN2O60269 458 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 PRG2P13727 222 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 CXCR1P25024 350 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 CRATP43155 626 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 ARFIP2P53365 341 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 NUDT6P53370 316 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 CRISP3P54108 245 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 DSCR9P59020 149 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 PRPS1P60891 318 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 DSTNP60981 165 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 BNIP2Q12982 314 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 RAB35Q15286 201 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 MST1LQ2TV78 715 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 RNF220Q5VTB9 566 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 C6orf89Q6UWU4 347 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 MSANTD1Q6ZTZ1 278 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 CCDC121Q6ZUS5 278 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 CXXC5Q7LFL8 322 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 TRPM8Q7Z2W7 1104 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 HIPK1Q86Z02 1210 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 EPHX4Q8IUS5 362 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 CADM2Q8N3J6 435 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 POMGNT2Q8NAT1 580 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 C3orf49Q96BT1 292 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 AURKBQ96GD4 344 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 TMEM19Q96HH6 336 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 ITCHQ96J02 903 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 OR52B2Q96RD2 323 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 TMEM120AQ9BXJ8 343 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 ZMAT4Q9H898 229 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 FKRPQ9H9S5 495 aa8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 ZNF443Q9Y2A4 671 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-221ENST00000520339 PLCE1Q9P212 2302 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 COL6A5A8TX70 2615 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 A0A0G2JPF8 293 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 FAM234BA2RU67 622 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 HNRNPCL2B2RXH8 293 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 HNRNPCL3B7ZW38 293 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 H7C417 338 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 UBDO15205 165 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 FRS3O43559 492 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 HNRNPCL1O60812 293 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 VAMP5O95183 116 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 BCHEP06276 602 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 HNRNPCL4P0DMR1 293 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 APOBEC3AP31941 199 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 SELENOPP49908 381 aa8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 POLR2JP52435 117 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-221ENST00000520339 COPZ1P61923 177 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms