RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PTAFRP25105 342 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 CD40P25942 277 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 MDH1P40925 334 aaKnown RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 CLDN17P56750 224 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 RGS8P57771 180 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 PRPS1P60891 318 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 SLC25A3Q00325 362 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 TGFBR3Q03167 851 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 CYP51A1Q16850 503 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ENTPD8Q5MY95 495 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 Q5PR19 223 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 METTL11BQ5VVY1 283 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 NIPAL3Q6P499 406 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 C5orf46Q6UWT4 87 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 C1orf162Q8NEQ5 155 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF417Q8TAU3 575 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 FBXW5Q969U6 566 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 TAMM41Q96BW9 452 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF837Q96EG3 531 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 TXNDC15Q96J42 360 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 RADILQ96JH8 1075 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF317Q96PQ6 595 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF587Q96SQ5 575 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 BDH2Q9BUT1 245 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 TRAF4Q9BUZ4 470 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 LINC00470Q9BZP3 86 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 KLHL14Q9P2G3 628 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 MGAT4BQ9UQ53 548 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 ANGPT4Q9Y264 503 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 B3GALT5Q9Y2C3 310 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 TEP1Q99973 2627 aaKnown RBP8.18□□□□□ -1.1
HDAC3-215ENST00000519474 USF3Q68DE3 2245 aa8.18□□□□□ -1.1
HDAC3-215ENST00000519474 HRNRQ86YZ3 2850 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 HEATR1Q9H583 2144 aaKnown RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 RPL36A-HNRNPH2H7BZ11 118 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 M0R1B8 84 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 PLPP3O14495 311 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 AIM2O14862 343 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 FMO6PO60774 539 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 NDUFS7O75251 213 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 LY6G6DO95868 133 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 HLA-DOBP13765 273 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 PCGF2P35227 344 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 ATP5J2P56134 94 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 RPS4XP62701 263 aaKnown RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 SPOCK1Q08629 439 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 TRMT5Q32P41 509 aaKnown RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 MMEL1Q495T6 779 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 COQ5Q5HYK3 327 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 PHYHD1Q5SRE7 291 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 REP15Q6BDI9 236 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 MZT2BQ6NZ67 158 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF613Q6PF04 617 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 KLHL17Q6TDP4 642 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 TMEM108Q6UXF1 575 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 WDR88Q6ZMY6 472 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 PATL1Q86TB9 770 aaKnown RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 DTX2Q86UW9 622 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 WDFY1Q8IWB7 410 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 SLC30A8Q8IWU4 369 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 C17orf78Q8N4C9 275 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 OR1K1Q8NGR3 316 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 C10orf82Q8WW14 230 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 ECSITQ9BQ95 431 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 TMEM43Q9BTV4 400 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 SELENONQ9NZV5 590 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 TESQ9UGI8 421 aaKnown RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 LAMP5Q9UJQ1 280 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 SLC13A4Q9UKG4 626 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 AMDHD2Q9Y303 409 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 MAGED1Q9Y5V3 778 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-215ENST00000519474 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
HDAC3-215ENST00000519474 OR6C65A6NJZ3 312 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 H7C1Q1 480 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 MRASO14807 208 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 KRT33AO76009 404 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 TTKP33981 857 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 CDKN1AP38936 164 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 ARF1P84077 181 aaKnown RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 TNK1Q13470 666 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 C1DQ13901 141 aaKnown RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 VEZF1Q14119 521 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 ITPR3Q14573 2671 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 MFSD13AQ14CX5 517 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 TBRG1Q3YBR2 411 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 HIKESHIQ53FT3 197 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 INTS11Q5TA45 600 aaKnown RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 ANKRD16Q6P6B7 361 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 SLC22A25Q6T423 547 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 B3GLCTQ6Y288 498 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 Q71RC1 249 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 ABHD12BQ7Z5M8 362 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 BIVMQ86UB2 503 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 RANBP3LQ86VV4 465 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-215ENST00000519474 TMEM123Q8N131 208 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 ADPRHL1Q8NDY3 354 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 OR8J3Q8NGG0 315 aa8.16□□□□□ -1.1
HDAC3-215ENST00000519474 VANGL1Q8TAA9 524 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms