RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	MGAM2	Q2M2H8	2515 aa		13.52	□□□□□ -0.25
LMNA-223	ENST00000515459		A0A0G2JPF8	293 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	LOC102725191	A0A1B0GVB3	256 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	HNRNPCL2	B2RXH8	293 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	HNRNPCL3	B7ZW38	293 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459		M0R082	166 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	HNRNPCL1	O60812	293 aa	Known RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	HNRNPCL4	P0DMR1	293 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	ETFA	P13804	333 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	IL12A	P29459	219 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	CRAT	P43155	626 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	MVD	P53602	400 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF311	Q5JNZ3	666 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	PHYHD1	Q5SRE7	291 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	C5orf46	Q6UWT4	87 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	H1FNT	Q75WM6	255 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	LRP11	Q86VZ4	500 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	KIRREL3	Q8IZU9	778 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF417	Q8TAU3	575 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	MGARP	Q8TDB4	240 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF75A	Q96N20	296 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF385D	Q9H6B1	395 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	MEAF6	Q9HAF1	191 aa		13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	MYEF2	Q9P2K5	600 aa	Known RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF346	Q9UL40	294 aa	Known RBP	13.51	□□□□□ -0.25
LMNA-223	ENST00000515459	LOC105371242	A0A075B767	164 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	TMEM247	A6NEH6	219 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	RFXANK	O14593	260 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	TRAF3IP2	O43734	574 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	NCR1	O76036	304 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	ALDOC	P09972	364 aa	Known RBP	13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	NAT2	P11245	290 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	GRPR	P30550	384 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	PTDSS1	P48651	473 aa	Known RBP	13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC1A6	P48664	564 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	DSTN	P60981	165 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	FXN	Q16595	210 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	AWAT1	Q58HT5	328 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	CARD17	Q5XLA6	110 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	C6orf89	Q6UWU4	347 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF813	Q6ZN06	617 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF627	Q7L945	461 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	NET1	Q7Z628	596 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	UEVLD	Q8IX04	471 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	C20orf196	Q8IYI0	205 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC38A4	Q969I6	547 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	TAAR8	Q969N4	342 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC35B4	Q969S0	331 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	SORT1	Q99523	831 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	ZBTB18	Q99592	522 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	SUCNR1	Q9BXA5	334 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	C12orf10	Q9HB07	376 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	B3GAT2	Q9NPZ5	323 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC52A3	Q9NQ40	469 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	G6PC2	Q9NQR9	355 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC6A13	Q9NSD5	602 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	AIG1	Q9NVV5	245 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	RPS6KB2	Q9UBS0	482 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	DUSP13	Q9UII6	198 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	FZR1	Q9UM11	496 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459	IFT52	Q9Y366	437 aa		13.5	□□□□□ -0.25
LMNA-223	ENST00000515459		A0A1W2PPW3	197 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	BIRC5	O15392	142 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	RP2	O75695	350 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	RAB36	O95755	333 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	AVP	P01185	164 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	B4GALT1	P15291	398 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	LSP1	P33241	339 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	GIPR	P48546	466 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	RAB1A	P62820	205 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	HOXC5	Q00444	222 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	MFSD13A	Q14CX5	517 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	ACSM5	Q6NUN0	579 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	SNX32	Q86XE0	403 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	ADPRHL1	Q8NDY3	354 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	TMEM19	Q96HH6	336 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	LRR1	Q96L50	414 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	EMC6	Q9BV81	110 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	TPT1P8	Q9HAU6	139 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	THUMPD1	Q9NXG2	353 aa	Known RBP	13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	ZNF224	Q9NZL3	707 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	SLC7A8	Q9UHI5	535 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	HAO1	Q9UJM8	370 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	FBXL3	Q9UKT7	428 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	POFUT2	Q9Y2G5	429 aa		13.49	□□□□□ -0.25
LMNA-223	ENST00000515459	TRAV36DV7	A0A075B6V5	113 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459		A0A0G2JMP0	313 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459		A0A0X1KG70	313 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	MS4A18	H0YCH9	400 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	MPZL1	O95297	269 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	ANP32D	O95626	131 aa		13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	NQO1	P15559	274 aa	Known RBP	13.48	□□□□□ -0.25
LMNA-223	ENST00000515459	CBL	P22681	906 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms