RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TRIM64CA6NLI5 447 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 G3V4G9 280 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 K7EQG2 157 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 NME2P1O60361 137 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 OR6A2O95222 327 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 TXNDC12O95881 172 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 HPRP00739 348 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 FHP07954 510 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ADORA3P0DMS8 318 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CT45A8P0DMV1 189 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CT45A9P0DMV2 189 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 COX6A1P12074 109 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ICAM2P13598 275 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 GABRA1P14867 456 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CD1DP15813 335 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 GATA1P15976 413 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 TNNI1P19237 187 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 PCMT1P22061 227 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 GPX3P22352 226 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 USF1P22415 310 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CRYGSP22914 178 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 DPP4P27487 766 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 TEAD1P28347 426 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 STIP1P31948 543 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CYLC1P35663 651 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ATP4BP51164 291 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CDH4P55283 916 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 HSD17B7P56937 341 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SRPXP78539 464 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 HTD2P86397 168 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 OC90Q02509 493 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 EIF4EBP2Q13542 120 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 HEPACAMQ14CZ8 416 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 NRF1Q16656 503 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 HSP90AA5PQ58FG0 334 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CT45A2Q5DJT8 189 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 DMRTC1Q5HYR2 192 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 RAET1GQ6H3X3 334 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SPINK14Q6IE38 97 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC25A25Q6KCM7 469 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 B3GLCTQ6Y288 498 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ABHD13Q7L211 337 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SETD3Q86TU7 594 aaPredicted RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 RNF130Q86XS8 419 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 GPD1LQ8N335 351 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 OR4L1Q8NH43 312 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 MUC7Q8TAX7 377 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 RASL10AQ92737 203 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 NABP1Q96AH0 204 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 FAF2Q96CS3 445 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CXorf40BQ96DE9 158 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF597Q96LX8 424 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SOSTQ9BQB4 213 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CCDC28BQ9BUN5 200 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC26A1Q9H2B4 701 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC40A1Q9NP59 571 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 PALMDQ9NP74 551 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ZCCHC3Q9NUD5 404 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 DDX28Q9NUL7 540 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 NECAP2Q9NVZ3 263 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 TAS2R3Q9NYW6 316 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 TECRQ9NZ01 308 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 THYN1Q9P016 225 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ACTR3BQ9P1U1 418 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 TDRKHQ9Y2W6 561 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 SCN2AQ99250 2005 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CADP27708 2225 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SYNJ2BP-COX16A0A087WUM0 186 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 A0A0D9SEW6 157 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF233A6NK53 670 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF724A8MTY0 619 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 PDZK1P1A8MUH7 402 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 GOLGA8SH3BPF8 625 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC28A1O00337 649 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 FBP2O00757 339 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 XPO1O14980 1071 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 GMNNO75496 209 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 BCAS2O75934 225 aaPredicted RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 OR2B3O76000 313 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 OR6B1O95007 311 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 IGSF6O95976 241 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 TGFAP01135 160 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC2A3P11169 496 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 EZRP15311 586 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 UGT1A6P19224 532 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 CXCR2P25025 360 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 DSCR10P59022 87 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 DAOAP59103 153 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 POLR2FP61218 127 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 RPS27AP62979 156 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 INCA1Q0VD86 236 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 HSPA14Q0VDF9 509 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 FASTKQ14296 549 aaKnown RBP2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC5A12Q1EHB4 618 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 ACER2Q5QJU3 275 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF730Q6ZMV8 503 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 SHISA6Q6ZSJ9 500 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 NLRP9Q7RTR0 991 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 TAC4Q86UU9 113 aa2.78□□□□□ -1.96
TOPBP1-208ENST00000511439 P2RY8Q86VZ1 359 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms