RNA–Protein interactions for RNA: ENST00000510817.1

TMEM173-208, Transcript of transmembrane protein 173, human

TSL 2

Gene TMEM173, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM173-208	ENST00000510817	GKN3P	P0CG01	181 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	ZNF250	P15622	560 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	H2AFX	P16104	143 aa	Predicted RBP	11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	IL7R	P16871	459 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	HPCA	P84074	193 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	MVK	Q03426	396 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	PCGF3	Q3KNV8	242 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	KLF17	Q5JT82	389 aa	Predicted RBP	11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	AVPI1	Q5T686	147 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	ANXA8L1	Q5VT79	327 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	ZNF584	Q8IVC4	421 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	C20orf196	Q8IYI0	205 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	CCDC63	Q8NA47	563 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	TESC	Q96BS2	214 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	ZNF48	Q96MX3	618 aa	Predicted RBP	11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	SEC14L4	Q9UDX3	406 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	MARCO	Q9UEW3	520 aa	Predicted RBP	11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	SLC7A8	Q9UHI5	535 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	DUSP13	Q9UII6	198 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	ZDHHC2	Q9UIJ5	367 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	CHST2	Q9Y4C5	530 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	NOX1	Q9Y5S8	564 aa		11.59	□□□□□ -0.55
TMEM173-208	ENST00000510817	COPE	O14579	308 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	SEC14L2	O76054	403 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	NUDT17	P0C025	328 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	PRG2	P13727	222 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	ALDH3A1	P30838	453 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	MAD2L1	Q13257	205 aa	Predicted RBP	11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	RNF220	Q5VTB9	566 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	RBMS3	Q6XE24	437 aa	Known RBP	11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	ANKRD46	Q86W74	232 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	RNF130	Q86XS8	419 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	DEFB108B	Q8NET1	73 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	POP5	Q969H6	163 aa	Known RBP	11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	KTI12	Q96EK9	354 aa	Predicted RBP	11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	ZIM3	Q96PE6	472 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	GPA33	Q99795	319 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	RHOXF2	Q9BQY4	288 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	SLC35A5	Q9BS91	424 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	PARD6B	Q9BYG5	372 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	HINT3	Q9NQE9	182 aa	Known RBP	11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	MKS1	Q9NXB0	559 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	PLEK2	Q9NYT0	353 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	NOP53	Q9NZM5	478 aa	Known RBP	11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	ZNF69	Q9UC07	566 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	NUP50	Q9UKX7	468 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	FZR1	Q9UM11	496 aa		11.58	□□□□□ -0.56
TMEM173-208	ENST00000510817	IGHV1-69-2	A0A0G2JMI3	117 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	ATP8B1	O43520	1251 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CDC14B	O60729	498 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	AHSA1	O95433	338 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CPSF4	O95639	269 aa	Known RBP	11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CLPTM1	O96005	669 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	SERPINA5	P05154	406 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CD79A	P11912	226 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	KRT4	P19013	534 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	SERPINB5	P36952	375 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CAPZA2	P47755	286 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	RAB1A	P62820	205 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CCL8	P80075	99 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	TEK	Q02763	1124 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	PIGF	Q07326	219 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	C6orf89	Q6UWU4	347 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	ZNF836	Q6ZNA1	936 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	RETREG3	Q86VR2	466 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	BCL6B	Q8N143	479 aa	Predicted RBP	11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CADM2	Q8N3J6	435 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	EIF1AD	Q8N9N8	165 aa	Known RBP	11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	ADPRHL1	Q8NDY3	354 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	AGR3	Q8TD06	166 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	TUBGCP3	Q96CW5	907 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	CCDC115	Q96NT0	180 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	DUX5	Q96PT3	197 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	MECR	Q9BV79	373 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	DPY30	Q9C005	99 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	TAAR3P	Q9P1P4	343 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	LEF1	Q9UJU2	399 aa	Predicted RBP	11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	FBXL3	Q9UKT7	428 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817	RYR3	Q15413	4870 aa		11.57	□□□□□ -0.56
TMEM173-208	ENST00000510817		A0A1W2PPW3	197 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	CLDN25	C9JDP6	229 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	MS4A18	H0YCH9	400 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817		M0R3G1	203 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	FAM153B	P0C7A2	387 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	CHI3L1	P36222	383 aa	Predicted RBP	11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	GIPR	P48546	466 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	COPZ1	P61923	177 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	GALK2	Q01415	458 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	MFSD13A	Q14CX5	517 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	CHI3L2	Q15782	390 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	MS4A18	Q3C1V0	323 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	GLIPR1L2	Q4G1C9	344 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	ZNF813	Q6ZN06	617 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	VRK2	Q86Y07	508 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	WDFY1	Q8IWB7	410 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	IFT20	Q8IY31	132 aa		11.56	□□□□□ -0.56
TMEM173-208	ENST00000510817	PEX5L	Q8IYB4	626 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms