RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 POU3F1Q03052 451 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 MDP1Q86V88 176 aa17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 RANBP3LQ86VV4 465 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 RBM45Q8IUH3 476 aaKnown RBP17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 C20orf196Q8IYI0 205 aa17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 C11orf65Q8NCR3 313 aa17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 ANKK1Q8NFD2 765 aa17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 EPYCQ99645 322 aa17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 CGREF1Q99674 301 aa17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 ARHGDIGQ99819 225 aa17.23■□□□□ 0.35
ARHGEF28-208ENST00000509848 SLC35F4A4IF30 521 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 HMGB1P1B2RPK0 211 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 ANGPT2O15123 496 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 AKAP8O43823 692 aaKnown RBP17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 USF1P22415 310 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 AHCYP23526 432 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 THBS4P35443 961 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 VLDLRP98155 873 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 CAMK2DQ13557 499 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 NFYCQ13952 458 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 NPTX1Q15818 432 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 C3orf36Q3SXR2 165 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 NHLRC1Q6VVB1 395 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 ADPRHL1Q8NDY3 354 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 BHLHE22Q8NFJ8 381 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 OR4D11Q8NGI4 311 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 OR6T1Q8NGN1 323 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 OR6S1Q8NH40 331 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 VANGL1Q8TAA9 524 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 PROX1Q92786 737 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 CORINQ9Y5Q5 1042 aa17.22■□□□□ 0.35
ARHGEF28-208ENST00000509848 CHD3Q12873 2000 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 CPSF4LA6NMK7 179 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 ZNF99A8MXY4 864 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 B9A039 149 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 C11orf98E9PRG8 122 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 PLPP3O14495 311 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 HLA-HP01893 362 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 IGHV4-31P0DP07 118 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 PAX7P23759 505 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 PDLIM4P50479 330 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 PIGFQ07326 219 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 GGTLC2Q14390 218 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 MFSD13AQ14CX5 517 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 WDR88Q6ZMY6 472 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 CXXC5Q7LFL8 322 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 HDXQ7Z353 690 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 ZCCHC24Q8N2G6 241 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 DPP10Q8N608 796 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 FAM169BQ8N8A8 192 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 SCAIQ8N9R8 606 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 OR4F15Q8NGB8 312 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 FOXN4Q96NZ1 517 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 KCNK17Q96T54 332 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 TMEM43Q9BTV4 400 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 NOX3Q9HBY0 568 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 MRPL39Q9NYK5 338 aaKnown RBP17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 FKBP7Q9Y680 259 aa17.21■□□□□ 0.35
ARHGEF28-208ENST00000509848 IGHV2OR16-5A0A0B4J2B6 119 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 A0A0G2JND7 137 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 SH3PXD2BA1X283 911 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 ZNF726A6NNF4 738 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 THY1P04216 161 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 CSF3P09919 207 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 CD79AP11912 226 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 ZNF16P17020 682 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 LSM11P83369 360 aaKnown RBP eCLIP17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 PUDPQ08623 228 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 RBBP4Q09028 425 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 CHRFAM7AQ494W8 412 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 ENTPD8Q5MY95 495 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 CYB5R2Q6BCY4 276 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 TSPYL5Q86VY4 417 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 SVOPLQ8N434 492 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 OR6N1Q8NGY5 312 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 OR10A6Q8NH74 314 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 MS4A3Q96HJ5 214 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 PLK3Q9H4B4 646 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 KAT8Q9H7Z6 458 aaKnown RBP17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 TRIM33Q9UPN9 1127 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 NOX1Q9Y5S8 564 aa17.2■□□□□ 0.34
ARHGEF28-208ENST00000509848 VWC2LB2RUY7 222 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 hCG_2039718K7EN88 272 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 EDF1O60869 148 aaKnown RBP17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 LYPD3O95274 346 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 ADORA3P0DMS8 318 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 ARR3P36575 388 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 NR4A2P43354 598 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 SF3A3Q12874 501 aaKnown RBP eCLIP17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 EFNB3Q15768 340 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 SWT1Q5T5J6 900 aaKnown RBP17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 KRT80Q6KB66 452 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 ZNF613Q6PF04 617 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 LINC00114Q6XXX2 140 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 ZNF813Q6ZN06 617 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 SPATA21Q7Z572 469 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 NUP37Q8NFH4 326 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 TAMM41Q96BW9 452 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 PIMREGQ9BSJ6 248 aa17.19■□□□□ 0.34
ARHGEF28-208ENST00000509848 B3GNT2Q9NY97 397 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms