RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 HFE2Q6ZVN8 426 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ERN2Q76MJ5 926 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 RBM23Q86U06 439 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 SERPINA11Q86U17 422 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GKN2Q86XP6 184 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CFAP52Q8N1V2 620 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GALNT16Q8N428 558 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TMEM217Q8N7C4 229 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR6K3Q8NGY3 331 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TNFRSF14Q92956 283 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NUDT11Q96G61 164 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MRGPRX1Q96LB2 322 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 APOLD1Q96LR9 279 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PRRC1Q96M27 445 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MGST2Q99735 147 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NDFIP1Q9BT67 221 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TMEM43Q9BTV4 400 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SLC26A1Q9H2B4 701 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MYOZ1Q9NP98 299 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 NDUFB11Q9NX14 153 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TAS2R5Q9NYW4 299 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 B4GALT6Q9UBX8 382 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TBX21Q9UL17 535 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 DIMT1Q9UNQ2 313 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 FZD1Q9UP38 647 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 HS3ST4Q9Y661 456 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NFS1Q9Y697 457 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 A0A1B0GTW7 788 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PRAMEF22A3QJZ6 481 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GPR31O00270 319 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 B3GALT2O43825 422 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 EIF1BO60739 113 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 SNNO75324 88 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 CHRM4P08173 479 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 H2BFMP0C1H6 154 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SLC35G6P0C7Q6 338 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RD3LP0DJH9 198 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MGST1P10620 155 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 FCARP24071 287 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SDHAP31040 664 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 KDELR2P33947 212 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PPM1AP35813 382 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GJA5P36382 358 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CSN1S1P47710 185 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 KLK7P49862 253 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GPM6AP51674 278 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PCBP4P57723 403 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 PPP2CAP67775 309 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GPLD1P80108 840 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SLC14A1Q13336 389 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CBX2Q14781 532 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 LINC01559Q495D7 138 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CPZQ66K79 652 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SFRP4Q6FHJ7 346 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 DLK2Q6UY11 383 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RANBP10Q6VN20 620 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 FBXW12Q6X9E4 464 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CDHR3Q6ZTQ4 885 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PLEKHH3Q7Z736 793 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CATSPERDQ86XM0 798 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 BPIFB2Q8N4F0 458 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 C11orf42Q8N5U0 333 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TMEM251Q8N6I4 163 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 BVESQ8NE79 360 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ANKK1Q8NFD2 765 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR5AU1Q8NGC0 362 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR4K5Q8NGD3 323 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR6K6Q8NGW6 343 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LKAAEAR1Q8TD35 194 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 XAGE5Q8WWM1 108 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NKD1Q969G9 470 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TOE1Q96GM8 510 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 ZC3HAV1LQ96H79 300 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 ASB16Q96NS5 453 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SOX7Q9BT81 388 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CHST11Q9NPF2 352 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 AKIP1Q9NQ31 210 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CRTAC1Q9NQ79 661 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TLR9Q9NR96 1032 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 FOXJ2Q9P0K8 574 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OPN4Q9UHM6 478 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 BTNL2Q9UIR0 455 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LHX6Q9UPM6 363 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PCDHGC4Q9Y5F7 938 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 DNAJC15Q9Y5T4 150 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TRAV9-1A0A075B6T8 112 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TRAV18A0A075B6X5 111 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 C7orf71A4D174 169 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TMEM212A6NML5 194 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 HIDE1A8MVS5 230 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 ITGB1BP1O14713 200 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 XRCC2O43543 280 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 RNGTTO60942 597 aaKnown RBP3.32□□□□□ -1.88
USP53-205ENST00000509769 NDUFC2O95298 119 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SLC35G4P0C7Q5 338 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 MYOGP15173 224 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 TACR1P25103 407 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 PSMB6P28072 239 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 SSTR2P30874 369 aa3.32□□□□□ -1.88
USP53-205ENST00000509769 IRS1P35568 1242 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms