RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 INTS11Q5TA45 600 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ULK3Q6PHR2 472 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CASP12Q6UXS9 341 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 B3GLCTQ6Y288 498 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CREB3L2Q70SY1 520 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 RANBP3LQ86VV4 465 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CDC20BQ86Y33 519 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 DEFB107AQ8IZN7 70 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 OFCC1Q8IZS5 231 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC43A2Q8N370 569 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF433Q8N7K0 673 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 WDR31Q8NA23 367 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 LRRC75AQ8NAA5 344 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CCDC197Q8NCU1 140 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ADPRHL1Q8NDY3 354 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 LILRB1Q8NHL6 650 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 FAM222BQ8WU58 562 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 HTRA1Q92743 480 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 NEUROG1Q92886 237 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC25A36Q96CQ1 311 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CMTM5Q96DZ9 223 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC47A1Q96FL8 570 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 TPD52L3Q96J77 140 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 PRRC1Q96M27 445 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 LRRC37BQ96QE4 947 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 OR2M2Q96R28 347 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 GPA33Q99795 319 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SH3GL1Q99961 368 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 HOPXQ9BPY8 73 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 TMEM204Q9BSN7 226 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ACTR6Q9GZN1 396 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 MCCC2Q9HCC0 563 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 GLRX2Q9NS18 164 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 RASSF1Q9NS23 344 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 MRGBPQ9NV56 204 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 MED29Q9NX70 200 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 A0A087WUU8 490 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 IGKV1D-43A0A0B4J1Z2 117 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TRBV4-1A0A0J9YWV2 114 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 A0A1W2PR80 420 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TUBAL3A6NHL2 446 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 hCG_2039718K7EN88 272 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 PLPP3O14495 311 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 CDC42EP2O14613 210 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 IMPA2O14732 288 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 SEC14L2O76054 403 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF682O95780 498 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 MT-ND1P03886 318 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TP53P04637 393 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 GPIP06744 558 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 UQCRBP14927 111 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 SSTR2P30874 369 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 LIMS1P48059 325 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 NCALDP61601 193 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 COPZ1P61923 177 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 RPS4XP62701 263 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 MELKQ14680 651 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TESK1Q15569 626 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 SFRP5Q5T4F7 317 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 GKAP1Q5VSY0 366 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 EEF1A1P5Q5VTE0 462 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 C9orf135Q5VTT2 229 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TBPL2Q6SJ96 375 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 Q6ZT83 130 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 GALNT5Q7Z7M9 940 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 BVESQ8NE79 360 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 PIK3C3Q8NEB9 887 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 BHLHE22Q8NFJ8 381 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 OR13C2Q8NGS9 318 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 OR6S1Q8NH40 331 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 MOSPD2Q8NHP6 518 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 DNAJA4Q8WW22 397 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 GEMIN6Q8WXD5 167 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 NMD3Q96D46 503 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 ZC3HAV1LQ96H79 300 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TXNDC15Q96J42 360 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 DACH2Q96NX9 599 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 CDRT15Q96T59 188 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 KLHL4Q9C0H6 718 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 FANCFQ9NPI8 374 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 DCAF13Q9NV06 445 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 MRPL39Q9NYK5 338 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TAS2R5Q9NYW4 299 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TAS2R1Q9NYW7 299 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 ADA2Q9NZK5 511 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF224Q9NZL3 707 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 NDUFAF4Q9P032 175 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 RIMS3Q9UJD0 308 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC9A8Q9Y2E8 581 aa6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 NOSIPQ9Y314 301 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 TEP1Q99973 2627 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-207ENST00000509162 C16orf97H3BN30 126 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 NDUFAB1O14561 156 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 ACOT8O14734 319 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 TBX1O43435 398 aa6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 EIF1BO60739 113 aaKnown RBP6.31□□□□□ -1.4
TOPBP1-207ENST00000509162 RAD51DO75771 328 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms