RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZNF837Q96EG3 531 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 SYT3Q9BQG1 590 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 SLITRK2Q9H156 845 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 MTHFD2LQ9H903 347 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 UNKLQ9H9P5 680 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ZMAT3Q9HA38 289 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 SSU72Q9NP77 194 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ASIC5Q9NY37 505 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 MARCOQ9UEW3 520 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 ZNF346Q9UL40 294 aaKnown RBP8.03□□□□□ -1.12
NEDD9-211ENST00000508546 PPIAL4AQ9Y536 164 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 CORINQ9Y5Q5 1042 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 NOX1Q9Y5S8 564 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 DSPPQ9NZW4 1301 aa8.03□□□□□ -1.12
NEDD9-211ENST00000508546 CDHR4A6H8M9 788 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 FTCDNL1E5RQL4 147 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 IGHV2-5P01817 119 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 DBIP07108 87 aaKnown RBP8.02□□□□□ -1.13
NEDD9-211ENST00000508546 PNMTP11086 282 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 KRT4P19013 534 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ZFP36P26651 326 aaKnown RBP8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ACAA2P42765 397 aaKnown RBP8.02□□□□□ -1.13
NEDD9-211ENST00000508546 CAPZA2P47755 286 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 IL13RA1P78552 427 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 GUCY1A3Q02108 690 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 EMX2Q04743 252 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ZP4Q12836 540 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 MAD2L1BPQ15013 274 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-211ENST00000508546 SYPL1Q16563 259 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 SMU1Q2TAY7 513 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ANXA8L1Q5VT79 327 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 DOK3Q7L591 496 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ZNF627Q7L945 461 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 LRP11Q86VZ4 500 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ANKRD46Q86W74 232 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 KDM8Q8N371 416 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ANKFN1Q8N957 763 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 ANKRD42Q8N9B4 389 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 PIK3C3Q8NEB9 887 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 VPS37AQ8NEZ2 397 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 AGR3Q8TD06 166 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 TUBGCP3Q96CW5 907 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 LRRC58Q96CX6 371 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 MS4A3Q96HJ5 214 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 APOPT1Q96IL0 206 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 OXGR1Q96P68 337 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 DPY30Q9C005 99 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 DENND2DQ9H6A0 471 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-211ENST00000508546 KCNK9Q9NPC2 374 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 INTS9Q9NV88 658 aaKnown RBP8.02□□□□□ -1.13
NEDD9-211ENST00000508546 MED29Q9NX70 200 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 NKIRAS2Q9NYR9 191 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 NKIRAS1Q9NYS0 192 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 MYEF2Q9P2K5 600 aaKnown RBP8.02□□□□□ -1.13
NEDD9-211ENST00000508546 B3GAT1Q9P2W7 334 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 OPN4Q9UHM6 478 aa8.02□□□□□ -1.13
NEDD9-211ENST00000508546 LOC102725191A0A1B0GVB3 256 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 AKAP8O43823 692 aaKnown RBP8.01□□□□□ -1.13
NEDD9-211ENST00000508546 SPAG7O75391 227 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 AHSA1O95433 338 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 CPSF4O95639 269 aaKnown RBP8.01□□□□□ -1.13
NEDD9-211ENST00000508546 HLA-HP01893 362 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 GKN3PP0CG01 181 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 NAT2P11245 290 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 ALDH3A1P30838 453 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 CHI3L1P36222 383 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-211ENST00000508546 CRYBB2P43320 205 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 ANXA11P50995 505 aaKnown RBP8.01□□□□□ -1.13
NEDD9-211ENST00000508546 SLC18A1P54219 525 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 COPZ1P61923 177 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 GALK2Q01415 458 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 TEKQ02763 1124 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 FBLN7Q53RD9 439 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 RBMS3Q6XE24 437 aaKnown RBP8.01□□□□□ -1.13
NEDD9-211ENST00000508546 PEX5LQ8IYB4 626 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 TMEM123Q8N131 208 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 CADM2Q8N3J6 435 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 MGARPQ8TDB4 240 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 TESCQ96BS2 214 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 LRR1Q96L50 414 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 OR2M2Q96R28 347 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 SLC35A5Q9BS91 424 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 PTDSS2Q9BVG9 487 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 C7orf69Q9H7B7 122 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 RLIMQ9NVW2 624 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 MKS1Q9NXB0 559 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 SLC7A8Q9UHI5 535 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 DUSP13Q9UII6 198 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 ZDHHC2Q9UIJ5 367 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 GPR160Q9UJ42 338 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 FBXL3Q9UKT7 428 aa8.01□□□□□ -1.13
NEDD9-211ENST00000508546 IGLV3-9A0A075B6K5 115 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 PPIAL4EA0A075B759 164 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 PPIAL4CA0A0B4J2A2 164 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 A0A1W2PPW3 197 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 DNAJC9-AS1A6NH13 148 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 C17orf100A8MU93 164 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 PPIAL4DF5H284 164 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 TM9SF1O15321 606 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms