RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZNF587BE7ETH6 402 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 PLPP3O14495 311 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 ARPC2O15144 300 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 TRAF3IP2O43734 574 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-209ENST00000506630 PIP5K1CO60331 668 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 SLC43A1O75387 559 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 MT-ND1P03886 318 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 HIST1H2ABP04908 130 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 HLA-DOBP13765 273 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 MSX2P35548 267 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-209ENST00000506630 PPA1Q15181 289 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 Q5PR19 223 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 TIMM23BQ5SRD1 257 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 HIST3H2AQ7L7L0 130 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 SLC46A3Q7Z3Q1 461 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 NANOGNBQ7Z5D8 188 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 CYP4Z1Q86W10 505 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 OFCC1Q8IZS5 231 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 LRRC17Q8N6Y2 441 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 HSD17B8Q92506 261 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 HIST1H2ACQ93077 130 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 MUCL1Q96DR8 90 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 SGTBQ96EQ0 304 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 PLPPR2Q96GM1 343 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 NSMCE2Q96MF7 247 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 HS6ST2Q96MM7 605 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
TCOF1-209ENST00000506630 BDH2Q9BUT1 245 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 MEPEQ9NQ76 525 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-209ENST00000506630 DCAF13Q9NV06 445 aaKnown RBP11.53□□□□□ -0.56
TCOF1-209ENST00000506630 MED29Q9NX70 200 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 CD300AQ9UGN4 299 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 ZNF229Q9UJW7 825 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 RCE1Q9Y256 329 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 MED31Q9Y3C7 131 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 NOX1Q9Y5S8 564 aa11.53□□□□□ -0.56
TCOF1-209ENST00000506630 H7C1Q1 480 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 PDLIM1O00151 329 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 KLF4O43474 513 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 SMPD2O60906 423 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 UPK3AO75631 287 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 OR7A10O76100 309 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 CDH2P19022 906 aaPredicted RBP11.52□□□□□ -0.57
TCOF1-209ENST00000506630 MPGP29372 298 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 NR1H2P55055 460 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 TGFBR3Q03167 851 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 TRAM2Q15035 370 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 FXNQ16595 210 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 CARD17Q5XLA6 110 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 OR7E24Q6IFN5 339 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 RINLQ6ZS11 566 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 TRPM8Q7Z2W7 1104 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 LRRC75A-AS1Q8N1F1 130 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 OR52N5Q8NH56 324 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 NANOS1Q8WY41 292 aaKnown RBP11.52□□□□□ -0.57
TCOF1-209ENST00000506630 PIGTQ969N2 578 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 EMC6Q9BV81 110 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 GORASP2Q9H8Y8 452 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 NGBQ9NPG2 151 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 C20orf141Q9NUB4 165 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 DNHD1Q96M86 4753 aa11.52□□□□□ -0.57
TCOF1-209ENST00000506630 PLCE1Q9P212 2302 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 LOC102725191A0A1B0GVB3 256 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 A0A1W2PR80 420 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 OR5H1A6NKK0 313 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 BLOC1S5-TXNDC5H3BN57 136 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 hCG_2039718K7EN88 272 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 FFAR1O14842 300 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 SMAD7O15105 426 aaKnown RBP11.51□□□□□ -0.57
TCOF1-209ENST00000506630 RNF13O43567 381 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF432O94892 652 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 ASAH2BP0C7U1 165 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 IFI30P13284 250 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 FUT1P19526 365 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-209ENST00000506630 GABRA6Q16445 453 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 SPATS1Q496A3 300 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 HMBOX1Q6NT76 420 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 LINGO2Q7L985 606 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 PXKQ7Z7A4 578 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 P2RY8Q86VZ1 359 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 GPR137CQ8N3F9 429 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 FAM86B1Q8N7N1 296 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 PIK3C3Q8NEB9 887 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 C1orf162Q8NEQ5 155 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-209ENST00000506630 TXNDC15Q96J42 360 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 OR2M2Q96R28 347 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 LINC00470Q9BZP3 86 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 UBTD1Q9HAC8 227 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 MAN2C1Q9NTJ4 1040 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 FAM32AQ9Y421 112 aaKnown RBP11.51□□□□□ -0.57
TCOF1-209ENST00000506630 ENPP4Q9Y6X5 453 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 CSPG4Q6UVK1 2322 aa11.51□□□□□ -0.57
TCOF1-209ENST00000506630 SLC35F4A4IF30 521 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF726A6NNF4 738 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 PDE5AO76074 875 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 UBOX5O94941 541 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 DIRAS1O95057 198 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 IGF2P01344 180 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms