RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 OBP2BQ9NPH6 170 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 MAN2C1Q9NTJ4 1040 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 C20orf141Q9NUB4 165 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 NDUFAF4Q9P032 175 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 STX18Q9P2W9 335 aaKnown RBP14.67□□□□□ -0.06
SNCA-209ENST00000506244 ST6GALNAC2Q9UJ37 374 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 TMEM5Q9Y2B1 443 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 V9GYQ6 96 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 CSMD1Q96PZ7 3565 aa14.67□□□□□ -0.06
SNCA-209ENST00000506244 POLQO75417 2590 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 A0A1W2PRQ8 180 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 MCIDASD6RGH6 385 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 BLOC1S5-TXNDC5H3BN57 136 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 UPK3AO75631 287 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 PRSS23O95084 383 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 RAF1P04049 648 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 T-ENOLP0DO92 83 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 SAGP10523 405 aaPredicted RBP14.66□□□□□ -0.06
SNCA-209ENST00000506244 HLA-DOBP13765 273 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 DNASE1P24855 282 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 DAP3P51398 398 aaKnown RBP14.66□□□□□ -0.06
SNCA-209ENST00000506244 ROR2Q01974 943 aaKnown RBP14.66□□□□□ -0.06
SNCA-209ENST00000506244 DGCR6Q14129 220 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 ANKDD1AQ495B1 522 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 FGD3Q5JSP0 725 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 RINLQ6ZS11 566 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 MBOAT2Q6ZWT7 520 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 SLC35D2Q76EJ3 337 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 NRMQ8IXM6 262 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 LRRC17Q8N6Y2 441 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 FAM86B1Q8N7N1 296 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 OR6N1Q8NGY5 312 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 OR52N5Q8NH56 324 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 OR6X1Q8NH79 312 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 C7orf34Q96L11 122 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 PIP5K1AQ99755 562 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 PLEKHF2Q9H8W4 249 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 SLC17A5Q9NRA2 495 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 MED29Q9NX70 200 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 TAS2R5Q9NYW4 299 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 RNF115Q9Y4L5 304 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 SLC25A15Q9Y619 301 aa14.66□□□□□ -0.06
SNCA-209ENST00000506244 SLC35F4A4IF30 521 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 NPIPB13A6NJU9 1138 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 NPIPB4C9JG80 1138 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 hCG_2039718K7EN88 272 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 PIP5K1CO60331 668 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 SEMG1P04279 462 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 FABP3P05413 133 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 CD3EP07766 207 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 IFNGR1P15260 489 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 CDH2P19022 906 aaPredicted RBP14.65□□□□□ -0.06
SNCA-209ENST00000506244 LOXP28300 417 aaPredicted RBP14.65□□□□□ -0.06
SNCA-209ENST00000506244 MSX2P35548 267 aaPredicted RBP14.65□□□□□ -0.06
SNCA-209ENST00000506244 CSNK1A1P48729 337 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 SLC9A3P48764 834 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 FOXG1P55316 489 aaPredicted RBP14.65□□□□□ -0.06
SNCA-209ENST00000506244 BIDP55957 195 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 PRPS1P60891 318 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 VLDLRP98155 873 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 PRKCDQ05655 676 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 RPL18Q07020 188 aaKnown RBP14.65□□□□□ -0.06
SNCA-209ENST00000506244 KEAP1Q14145 624 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 NCMAPQ5T1S8 102 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 CARD17Q5XLA6 110 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 LCN8Q6JVE9 175 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 TMEM108Q6UXF1 575 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 ZNF704Q6ZNC4 412 aaPredicted RBP14.65□□□□□ -0.06
SNCA-209ENST00000506244 C20orf204Q6ZNR8 217 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 C20orf196Q8IYI0 205 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 OR1K1Q8NGR3 316 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 HS3ST6Q96QI5 342 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 ZNF347Q96SE7 839 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 EMC6Q9BV81 110 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 ULBP2Q9BZM5 246 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 TRIM15Q9C019 465 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 CRLF2Q9HC73 371 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 GPR35Q9HC97 309 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 INIPQ9NRY2 104 aa14.65□□□□□ -0.06
SNCA-209ENST00000506244 LRBAP50851 2863 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 CREBBPQ92793 2442 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 SPG11Q96JI7 2443 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 A0A087WUU8 490 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 EFCAB9A8MZ26 197 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 ENTPD5O75356 428 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 UBOX5O94941 541 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 BCL10O95999 233 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 NR2C1P13056 603 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 HOXB1P14653 301 aaPredicted RBP14.64□□□□□ -0.07
SNCA-209ENST00000506244 UBE2NP61088 152 aaKnown RBP14.64□□□□□ -0.07
SNCA-209ENST00000506244 BSPH1Q075Z2 132 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 LGALS3BPQ08380 585 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 CAMK2DQ13557 499 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 TRIM25Q14258 630 aaKnown RBP14.64□□□□□ -0.07
SNCA-209ENST00000506244 TAF11Q15544 211 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 ANKRD16Q6P6B7 361 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 SEZ6L2Q6UXD5 910 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 DHFR2Q86XF0 187 aa14.64□□□□□ -0.07
SNCA-209ENST00000506244 MAGEE2Q8TD90 523 aaPredicted RBP14.64□□□□□ -0.07
SNCA-209ENST00000506244 NRGNQ92686 78 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms