RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TACR3P29371 465 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 HTR3AP46098 478 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 GIPRP48546 466 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 ZNF81P51508 661 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 PCBP3P57721 371 aaKnown RBP10.48□□□□□ -0.73
LSM6-204ENST00000504181 RAB1AP62820 205 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 PAX2Q02962 417 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 BST1Q10588 318 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 RAB39AQ14964 217 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 UNC50Q53HI1 259 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 GPR157Q5UAW9 335 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 KLHL7Q8IXQ5 586 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 KDM8Q8N371 416 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 CLHC1Q8NHS4 586 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 FAM76AQ8TAV0 307 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 DCAKDQ8WVC6 231 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 REEP4Q9H6H4 257 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 GPATCH2Q9NW75 528 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 ZNF224Q9NZL3 707 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 RCE1Q9Y256 329 aa10.48□□□□□ -0.73
LSM6-204ENST00000504181 IGHV2-70DA0A0C4DH43 119 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 SERTM1A2A2V5 107 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 TM9SF1O15321 606 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 VAMP5O95183 116 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 MT-ND5P03915 603 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 KRT16P08779 473 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 DRD4P21917 467 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 CCT3P49368 545 aaKnown RBP10.47□□□□□ -0.73
LSM6-204ENST00000504181 GNB2P62879 340 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 DR1Q01658 176 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 UAP1Q16222 522 aaPredicted RBP10.47□□□□□ -0.73
LSM6-204ENST00000504181 SPRNQ5BIV9 151 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 FAM209AQ5JX71 171 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 HMGN2P46Q86SG4 172 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 LYG1Q8N1E2 194 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 PAQR4Q8N4S7 273 aaPredicted RBP10.47□□□□□ -0.73
LSM6-204ENST00000504181 ARFGAP2Q8N6H7 521 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 GEMIN6Q8WXD5 167 aaKnown RBP10.47□□□□□ -0.73
LSM6-204ENST00000504181 ZNF764Q96H86 408 aaPredicted RBP10.47□□□□□ -0.73
LSM6-204ENST00000504181 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 TAPBPLQ9BX59 468 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 DENND2DQ9H6A0 471 aaPredicted RBP10.47□□□□□ -0.73
LSM6-204ENST00000504181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
LSM6-204ENST00000504181 SLC35A3Q9Y2D2 325 aa10.47□□□□□ -0.73
LSM6-204ENST00000504181 WI2-2373I1.2A0A1W2PRP0 233 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 CLDN24A6NM45 220 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 NPIPB8E9PQR5 432 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 M0R3G1 203 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 TBX19O60806 448 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 STX11O75558 287 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 ENO1P06733 434 aaKnown RBP10.46□□□□□ -0.73
LSM6-204ENST00000504181 GSTA2P09210 222 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 SBK3P0C264 359 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 THRBP10828 461 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 CCL2P13500 99 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 AQP5P55064 265 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 FOXA1P55317 472 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 RPS26P62854 115 aaKnown RBP10.46□□□□□ -0.73
LSM6-204ENST00000504181 PLAURQ03405 335 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 RBBP4Q09028 425 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 NAB1Q13506 487 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 SPDYE7PQ495Y7 208 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 PHYHD1Q5SRE7 291 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 ZNF678Q5SXM1 525 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 TEX35Q5T0J7 233 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 DHRS7BQ6IAN0 325 aaPredicted RBP10.46□□□□□ -0.73
LSM6-204ENST00000504181 C6orf89Q6UWU4 347 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 ZNF813Q6ZN06 617 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 GDPGP1Q6ZNW5 385 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 ZNF584Q8IVC4 421 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 LRRC8AQ8IWT6 810 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 OR56A1Q8NGH5 318 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 OR5AK3PQ8NH89 298 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 ZNF519Q8TB69 540 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 C11orf40Q8WZ69 217 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 TSSK3Q96PN8 268 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 TMEM237Q96Q45 408 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 OSBPL9Q96SU4 736 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 PRPF18Q99633 342 aaKnown RBP10.46□□□□□ -0.73
LSM6-204ENST00000504181 SSBP3Q9BWW4 388 aaPredicted RBP10.46□□□□□ -0.73
LSM6-204ENST00000504181 RASD1Q9Y272 281 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 LRCH1Q9Y2L9 728 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 SNX24Q9Y343 169 aa10.46□□□□□ -0.73
LSM6-204ENST00000504181 PCLOQ9Y6V0 5065 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 LCE6AA0A183 80 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 SEC22BO75396 215 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 PATE4P0C8F1 98 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 B4GALT1P15291 398 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 STX2P32856 288 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 BNIP2Q12982 314 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 CAMK2DQ13557 499 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 PDE7AQ13946 482 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 NSUN5P1Q3KNT7 163 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 FAM153CQ494X1 144 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 TMEM155Q4W5P6 130 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 KLHL22Q53GT1 634 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 TTMPQ5BVD1 217 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 CASC10Q5T4H9 136 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 RNF130Q86XS8 419 aa10.45□□□□□ -0.74
LSM6-204ENST00000504181 DDIASQ8IXT1 998 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms