RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 OR1L4Q8NGR5 311 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 OR5M11Q96RB7 305 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 PITX2Q99697 317 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 RBM38Q9H0Z9 239 aaKnown RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 KCNMB3Q9NPA1 279 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 COL20A1Q9P218 1284 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TSSC4Q9Y5U2 329 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 FAM171A2A8MVW0 826 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 B3GALT2O43825 422 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 C22orf31O95567 290 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 GCGP01275 180 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 LPLP06858 475 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 HLA-GP17693 338 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SLC6A3Q01959 620 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 CD47Q08722 323 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 LRRC37A5PQ49AS3 106 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SDHAF4Q5VUM1 108 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 C12orf76Q8N812 135 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM102Q8N9M5 508 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 LYPD6BQ8NI32 183 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 JOSD2Q8TAC2 188 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 ARRDC2Q8TBH0 407 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 FCAMRQ8WWV6 532 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 BORCS7Q96B45 105 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SLC35A4Q96G79 324 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 EFCAB11Q9BUY7 163 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 ADARB2Q9NS39 739 aaKnown RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 PTGFRNQ9P2B2 879 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TBX21Q9UL17 535 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TCP10L2B9ZVM9 353 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SEMA7AO75326 666 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 USP2O75604 605 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 OR4F21O95013 312 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 CST1P01037 141 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 ADORA1P30542 326 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 MAGEA5P43359 124 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 HINT1P49773 126 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 DUSP3P51452 185 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SOX8P57073 446 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TEAD2Q15562 447 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 NCEH1Q6PIU2 408 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 DHRS13Q6UX07 377 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 RNF111Q6ZNA4 994 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 MED25Q71SY5 747 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 DND1Q8IYX4 353 aaKnown RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 OR2T27Q8NH04 317 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM19Q96HH6 336 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 FAM46AQ96IP4 442 aaKnown RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF582Q96NG8 517 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 PCGF1Q9BSM1 259 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 MFSD1Q9H3U5 465 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TAF9BQ9HBM6 251 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 MYOZ2Q9NPC6 264 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 MRM2Q9UI43 246 aaKnown RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 PPIL1Q9Y3C6 166 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 BACE2Q9Y5Z0 518 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 F5H5P2 479 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 BCKDHAP12694 445 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 BDKRB1P46663 353 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TUSC3Q13454 348 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 NKPD1Q17RQ9 610 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 CT83Q5H943 113 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 RABL3Q5HYI8 236 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 USP17L6PQ6QN14 398 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SMAP2Q8WU79 429 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SEH1LQ96EE3 360 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 WDR76Q9H967 626 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 B4GALT6Q9UBX8 382 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 ZDHHC8Q9ULC8 765 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TRAPPC4Q9Y296 219 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 LMO7Q8WWI1 1683 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 C9J4A7 227 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 CDIPTO14735 213 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 HCRTR1O43613 425 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SLC25A12O75746 678 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 PEX11BO96011 259 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 AK4P27144 223 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TDGF1P3P51864 188 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM128Q5BJH2 165 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 DET1Q7L5Y6 550 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 SPPL2CQ8IUH8 684 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 FAM219AQ8IW50 185 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 LGI4Q8N135 537 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 LTB4R2Q9NPC1 389 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 B3GAT2Q9NPZ5 323 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 FKBP11Q9NYL4 201 aa5.78□□□□□ -1.48
CLCN3-204ENST00000504131 GGT3PA6NGU5 568 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 SLC16A7O60669 478 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 STC2O76061 302 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 SERPINE1P05121 402 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 CTSLP07711 333 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 CELP19835 753 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 OR1D2P34982 312 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 PBX1P40424 430 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 GLRBP48167 497 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 CXCR3P49682 368 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 DAOAP59103 153 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 FPGSQ05932 587 aa5.77□□□□□ -1.49
CLCN3-204ENST00000504131 PLCXD2Q0VAA5 305 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms