RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 SPATA22Q8NHS9 363 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 CNOT9Q92600 299 aaKnown RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 GTF3AQ92664 365 aaKnown RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 NRGNQ92686 78 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 TFGQ92734 400 aaPredicted RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 C8orf44Q96CB5 159 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 HIST1H2AHQ96KK5 128 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 C10orf90Q96M02 699 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 OR2M2Q96R28 347 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 TRIB3Q96RU7 358 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 HIST1H2AJQ99878 128 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 NKX6-2Q9C056 277 aaPredicted RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 CHRNA10Q9GZZ6 450 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 SLC25A51Q9H1U9 297 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 SLC26A1Q9H2B4 701 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 CXXC4Q9H2H0 198 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 NCOR1P1Q9H4R4 102 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 ANKRA2Q9H9E1 313 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 SEBOXQ9HB31 216 aaPredicted RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 SERHLQ9NQF3 203 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 EXOSC3Q9NQT5 275 aaKnown RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 CUTCQ9NTM9 273 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 RLIMQ9NVW2 624 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 CNOT2Q9NZN8 540 aaKnown RBP4.1□□□□□ -1.75
MATR3-202ENST00000502422 MIOXQ9UGB7 285 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 PHF11Q9UIL8 331 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 SCP2D1Q9UJQ7 156 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 CHST2Q9Y4C5 530 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 ASB1Q9Y576 335 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 DNHD1Q96M86 4753 aa4.1□□□□□ -1.75
MATR3-202ENST00000502422 ABCA4P78363 2273 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 A0A087X0M5 115 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 A0A1B0GWJ7 208 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 A0A1B0GX30 115 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 NPIPA5E9PKD4 350 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 E9PLN8 166 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 CLN5O75503 358 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZNF682O95780 498 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 FABP3P05413 133 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 SERPINA7P05543 415 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZGLP1P0C6A0 271 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 SPP1P10451 314 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 UROSP10746 265 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 PIPP12273 146 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 PSMA1P25786 263 aaKnown RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 SDC2P34741 201 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 GPX4P36969 197 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 BDKRB1P46663 353 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 IDH2P48735 452 aaKnown RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 ALDH9A1P49189 494 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 AGTR2P50052 363 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 P2RY4P51582 365 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 CRYBA2P53672 197 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 CTBP2P56545 445 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 PPP3R1P63098 170 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 CACNG1Q06432 222 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 RBBP4Q09028 425 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 PCOLCEQ15113 449 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 SPHARQ15513 63 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZIC1Q15915 447 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 RFTN2Q52LD8 501 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 SPIN4Q56A73 249 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 TCTE1Q5JU00 501 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 FAM74A1Q5RGS3 127 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 HES5Q5TA89 166 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 C22orf42Q6IC83 251 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 PAQR6Q6TCH4 344 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 LUZP2Q86TE4 346 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 NKAIN4Q8IVV8 208 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 MRPL41Q8IXM3 137 aaKnown RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 ARMC10Q8N2F6 343 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 METTL27Q8N6F8 245 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 L3MBTL4Q8NA19 623 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZBTB34Q8NCN2 500 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 MOSPD2Q8NHP6 518 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 RHEBL1Q8TAI7 183 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 TMEM163Q8TC26 289 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 STT3BQ8TCJ2 826 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 GLYATL2Q8WU03 294 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 TSPAN17Q96FV3 270 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 IMP4Q96G21 291 aaKnown RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZNF845Q96IR2 970 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 C7orf34Q96L11 122 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 LINC00615Q96LM1 132 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 EPYCQ99645 322 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 NRTNQ99748 197 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 ATF6BQ99941 703 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 TBL1YQ9BQ87 522 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 VKORC1Q9BQB6 163 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 C1QTNF3Q9BXJ4 246 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 DNTTIP1Q9H147 329 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 DDX31Q9H8H2 851 aaKnown RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 SLC25A19Q9HC21 320 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 KCNJ16Q9NPI9 418 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 IL17CQ9P0M4 197 aa4.09□□□□□ -1.75
MATR3-202ENST00000502422 MARCH4Q9P2E8 410 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 MYEF2Q9P2K5 600 aaKnown RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 ZNF282Q9UDV7 671 aaPredicted RBP4.09□□□□□ -1.75
MATR3-202ENST00000502422 CRLS1Q9UJA2 301 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms