RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	KDM8	Q8N371	416 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	LSM14A	Q8ND56	463 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	NPEPL1	Q8NDH3	523 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	OXGR1	Q96P68	337 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	SNX18	Q96RF0	628 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	UCN2	Q96RP3	112 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	IL4I1	Q96RQ9	567 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	NMNAT2	Q9BZQ4	307 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	PRDM14	Q9GZV8	571 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF71	Q9NQZ8	489 aa	Predicted RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	PLCXD1	Q9NUJ7	323 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	KLHL21	Q9UJP4	597 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	ZMIZ1	Q9ULJ6	1067 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	RASD1	Q9Y272	281 aa		10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	SPEN	Q96T58	3664 aa	Known RBP	10.85	□□□□□ -0.67
MATR3-231	ENST00000502394	TEX13C	A0A0J9YWL9	993 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	SH3D21	A4FU49	640 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC1A7	O00341	560 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	RNF13	O43567	381 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	TLX2	O43763	284 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ENTPD6	O75354	484 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	VAMP5	O95183	116 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	OR6A2	O95222	327 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	CRYAB	P02511	175 aa	Known RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ENPP1	P22413	925 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	CRHBP	P24387	322 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	FMO3	P31513	532 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	CDKN2A	P42771	156 aa	Known RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC15A1	P46059	708 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	CARD18	P57730	90 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	RPL27	P61353	136 aa	Known RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	HSF1	Q00613	529 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ITGAD	Q13349	1161 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	CRMP1	Q14194	572 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC17A1	Q14916	467 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	KCTD21	Q4G0X4	260 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	RBM48	Q5RL73	367 aa	Known RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	PDSS1	Q5T2R2	415 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ADGRE4P	Q86SQ3	457 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	WDFY1	Q8IWB7	410 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	UBQLNL	Q8IYU4	475 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF786	Q8N393	782 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ARIH2OS	Q8N7S6	290 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	SLC37A3	Q8NCC5	494 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ASB10	Q8WXI3	467 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	PTP4A1	Q93096	173 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	CPNE4	Q96A23	557 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	RASD2	Q96D21	266 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF845	Q96IR2	970 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ZNF582	Q96NG8	517 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	SIGLEC11	Q96RL6	698 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	NAA11	Q9BSU3	229 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	TEX12	Q9BXU0	123 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	LDAH	Q9H6V9	325 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	FKBP14	Q9NWM8	211 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	KLHL13	Q9P2N7	655 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	GPR52	Q9Y2T5	361 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	NOX1	Q9Y5S8	564 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	KIAA1549	Q9HCM3	1950 aa		10.84	□□□□□ -0.67
MATR3-231	ENST00000502394	ALPK2	Q86TB3	2170 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	IGHV3-15	A0A0B4J1V0	119 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNF716	A6NP11	495 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	NPIPA5	E9PKD4	350 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	CYTIP	O60759	359 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	TNFAIP8	O95379	198 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	IFNG	P01579	166 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	LYN	P07948	512 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	SLC2A5	P22732	501 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	AHCY	P23526	432 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	NOS3	P29474	1203 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	EIF1AX	P47813	144 aa	Known RBP	10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	TDGF1P3	P51864	188 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	SLC16A1	P53985	500 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	POU3F1	Q03052	451 aa	Predicted RBP	10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	3e-7	■■□□□ 12.2
MATR3-231	ENST00000502394	TOP3A	Q13472	1001 aa	Predicted RBP	10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	KRR1	Q13601	381 aa	Known RBP	10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	MEDAG	Q5VYS4	303 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	NXNL2	Q5VZ03	156 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	SLC35D2	Q76EJ3	337 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	CXXC5	Q7LFL8	322 aa	Known RBP	10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	FGD2	Q7Z6J4	655 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	CPO	Q8IVL8	374 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	SDR9C7	Q8NEX9	313 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	OR52E2	Q8NGJ4	325 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	OR4K13	Q8NH42	304 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	ZPLD1	Q8TCW7	415 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	ZHX1-C8orf76	Q96EF9	292 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	LRR1	Q96L50	414 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	GPR137	Q96N19	417 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	SF3B5	Q9BWJ5	86 aa	Known RBP	10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	HCAR1	Q9BXC0	346 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	DUSP21	Q9H596	190 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	CLN6	Q9NWW5	311 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	DNAJC27	Q9NZQ0	273 aa		10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	VSX1	Q9NZR4	365 aa	Predicted RBP	10.83	□□□□□ -0.68
MATR3-231	ENST00000502394	ING1	Q9UK53	422 aa	Predicted RBP	10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms