RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 EGLN3Q9H6Z9 239 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 C8orf4Q9NR00 106 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 PARPBPQ9NWS1 579 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 REV1Q9UBZ9 1251 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 ORC6Q9Y5N6 252 aa19.34■□□□□ 0.69
C9orf3-222ENST00000496567 A0A0G2JNJ9 132 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 MCIDASD6RGH6 385 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 H3BN98 237 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 SOCS2O14508 198 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 TRAF3IP2O43734 574 aaPredicted RBP19.33■□□□□ 0.69
C9orf3-222ENST00000496567 ALPLP05186 524 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 CD14P08571 375 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF26P17031 533 aaPredicted RBP19.33■□□□□ 0.69
C9orf3-222ENST00000496567 DAP3P51398 398 aaKnown RBP19.33■□□□□ 0.69
C9orf3-222ENST00000496567 THSD4Q6ZMP0 1018 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 ZIC4Q8N9L1 334 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 NAXEQ8NCW5 288 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 SAMD8Q96LT4 415 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF385AQ96PM9 386 aaKnown RBP19.33■□□□□ 0.69
C9orf3-222ENST00000496567 TXNIPQ9H3M7 391 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 TBC1D23Q9NUY8 699 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF629Q9UEG4 869 aaPredicted RBP19.33■□□□□ 0.69
C9orf3-222ENST00000496567 Q9UFV3 132 aa19.33■□□□□ 0.69
C9orf3-222ENST00000496567 SOX14O95416 240 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 IL18BPO95998 194 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 BCL10O95999 233 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 IFNGR1P15260 489 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 OPRM1P35372 400 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 KIR2DL2P43627 348 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 CLDN17P56750 224 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 SIRPAP78324 504 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 FOXF2Q12947 444 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 SLC36A3Q495N2 470 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 LPCAT4Q643R3 524 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 NHLRC1Q6VVB1 395 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 NCCRP1Q6ZVX7 275 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 HDDC2Q7Z4H3 204 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 IGFN1Q86VF2 1251 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 OR6K3Q8NGY3 331 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 TEX47Q8TBZ9 253 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 KATNB1Q9BVA0 655 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 POLDIP3Q9BY77 421 aaKnown RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 NRIP3Q9NQ35 241 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 IL20RAQ9UHF4 553 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 TMEFF2Q9UIK5 374 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 SLC5A6Q9Y289 635 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 MRPL33O75394 65 aaKnown RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 IGHMP01871 453 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 TP53P04637 393 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 CDH2P19022 906 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 PEX2P28328 305 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 RPS6KA3P51812 740 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 RAD23AP54725 363 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 ESRRGP62508 458 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 ACKR1Q16570 336 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 LRRC36Q1X8D7 754 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 OGFRL1Q5TC84 451 aaPredicted RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 AAED1Q7RTV5 226 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 CCDC120Q96HB5 630 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 ADAD1Q96M93 576 aaKnown RBP19.32■□□□□ 0.68
C9orf3-222ENST00000496567 SLC29A1Q99808 456 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 IFT27Q9BW83 186 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 ENKD1Q9H0I2 346 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 MED29Q9NX70 200 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 COQ3Q9NZJ6 369 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 RCE1Q9Y256 329 aa19.32■□□□□ 0.68
C9orf3-222ENST00000496567 ZNF726A6NNF4 738 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 TNFSF13O75888 250 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 APEHP13798 732 aaKnown RBP19.31■□□□□ 0.68
C9orf3-222ENST00000496567 POU1F1P28069 291 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 SMSP52788 366 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 RPL27P61353 136 aaKnown RBP19.31■□□□□ 0.68
C9orf3-222ENST00000496567 GPR139Q6DWJ6 353 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 PACRGLQ8N7B6 248 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 TXNDC15Q96J42 360 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 TSSK6Q9BXA6 273 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 PLA2G12AQ9BZM1 189 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 GRHPRQ9UBQ7 328 aa19.31■□□□□ 0.68
C9orf3-222ENST00000496567 ERRFI1Q9UJM3 462 aaPredicted RBP19.31■□□□□ 0.68
C9orf3-222ENST00000496567 DVL2O14641 736 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 MITFO75030 526 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-222ENST00000496567 PLA2G2AP14555 144 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 BIDP55957 195 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 ERVK-25P63136 954 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 TOP3AQ13472 1001 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-222ENST00000496567 CLEC12AQ5QGZ9 265 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 FAM205BPQ63HN1 556 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 NIPAL3Q6P499 406 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 CASP12Q6UXS9 341 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 NUFIP2Q7Z417 695 aaKnown RBP19.3■□□□□ 0.68
C9orf3-222ENST00000496567 ZNF100Q8IYN0 542 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 OR2T33Q8NG76 320 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 OR8D4Q8NGM9 314 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 OR6X1Q8NH79 312 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 ASB5Q8WWX0 329 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 VCXQ9H320 206 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 ZNF346Q9UL40 294 aaKnown RBP19.3■□□□□ 0.68
C9orf3-222ENST00000496567 BAIAP2Q9UQB8 552 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 RNF6Q9Y252 685 aa19.3■□□□□ 0.68
C9orf3-222ENST00000496567 MYO7BQ6PIF6 2116 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms