RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 PRSS27Q9BQR3 290 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 TACO1Q9BSH4 297 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 SF3B5Q9BWJ5 86 aaKnown RBP5.98□□□□□ -1.45
VPS52-219ENST00000493379 TMEM27Q9HBJ8 222 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 TCF7L1Q9HCS4 588 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 CHST11Q9NPF2 352 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ALKBH4Q9NXW9 302 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ACTR3BQ9P1U1 418 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 ASH2LQ9UBL3 628 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 A4GNTQ9UNA3 340 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 SLC9A8Q9Y2E8 581 aa5.98□□□□□ -1.45
VPS52-219ENST00000493379 TRAPPC13A5PLN9 417 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 AQP7P3A6NL99 342 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 FAM90A27PA6NNH2 459 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 M0R3H8 397 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SULT2B1O00204 365 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 FFAR1O14842 300 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SEC14L5O43304 696 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 FRS3O43559 492 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 GMFGO60234 142 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ATP5HO75947 161 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 VAMP5O95183 116 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 OPN1SWP03999 348 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 OPN1LWP04000 364 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 GPIP06744 558 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 YES1P07947 543 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 INHBBP09529 407 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 TMIGD3P0DMS9 266 aaPredicted RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 CD40P25942 277 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SDHAP31040 664 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SFTPDP35247 375 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 GDNFP39905 211 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 RBM34P42696 430 aaKnown RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 CCR4P51679 360 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 HMGA2P52926 109 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 CDH12P55289 794 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 RGS8P57771 180 aaPredicted RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 SLC35A1P78382 337 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 MS4A2Q01362 244 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 TRAP1Q12931 704 aaKnown RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 BNIP2Q12982 314 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 MFSD13AQ14CX5 517 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 PDCD1Q15116 288 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SGCBQ16585 318 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 MTX3Q5HYI7 312 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ALG10BQ5I7T1 473 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ENTPD8Q5MY95 495 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 C1QTNF12Q5T7M4 302 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 FAM69AQ5T7M9 428 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 C1orf140Q5VVS0 124 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 WDR88Q6ZMY6 472 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 FCRLAQ7L513 359 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 PIWIL3Q7Z3Z3 882 aaKnown RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 CARM1Q86X55 608 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 RBM45Q8IUH3 476 aaKnown RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 UBQLNLQ8IYU4 475 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 RNF113BQ8IZP6 322 aaKnown RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 ZIC4Q8N9L1 334 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ADPRHL1Q8NDY3 354 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 OR6K3Q8NGY3 331 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SLC26A7Q8TE54 656 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ADAMTS16Q8TE57 1224 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 CA5BP1Q8WTZ4 195 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 PROX1Q92786 737 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 INTS12Q96CB8 462 aaKnown RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 C16orf92Q96LL3 132 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 HS6ST2Q96MM7 605 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 OR5B2Q96R09 309 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 FUZQ9BT04 418 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 AMBRA1Q9C0C7 1298 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 OR11A1Q9GZK7 315 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 OR10A4Q9H209 315 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 MMADHCQ9H3L0 296 aaPredicted RBP5.97□□□□□ -1.45
VPS52-219ENST00000493379 ANKRD19PQ9H560 264 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 KCNJ16Q9NPI9 418 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ADPRHL2Q9NX46 363 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ELOVL5Q9NYP7 299 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 ADA2Q9NZK5 511 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 KLHL9Q9P2J3 617 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 MAGEL2Q9UJ55 1249 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SH3BGRL2Q9UJC5 107 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 RPS6KA6Q9UK32 745 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 B3GALT5Q9Y2C3 310 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 SH3GLB1Q9Y371 365 aa5.97□□□□□ -1.45
VPS52-219ENST00000493379 TRAV36DV7A0A075B6V5 113 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 A0A1W2PRQ8 180 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 TCRBV5S2A0A599 114 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 ZNF814B7Z6K7 855 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 MS4A18H0YCH9 400 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 PDLIM1O00151 329 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 GPR171O14626 319 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 SPRY1O43609 319 aaPredicted RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 SYNGR4O95473 234 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 MT-ATP6P00846 226 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 SERPINA1P01009 418 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 IGHA1P01876 353 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 BGLAPP02818 100 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 HOXB6P17509 224 aaKnown RBP5.96□□□□□ -1.46
VPS52-219ENST00000493379 FPR1P21462 350 aa5.96□□□□□ -1.46
VPS52-219ENST00000493379 SLC7A1P30825 629 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms