RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 ECSITQ9BQ95 431 aa8.01□□□□□ -1.13
SUPT20H-220ENST00000490716 NOX1Q9Y5S8 564 aa8.01□□□□□ -1.13
SUPT20H-220ENST00000490716 IGHV1-18A0A0C4DH31 117 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 C5orf58C9J3I9 102 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 HS3ST1O14792 307 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ARPC2O15144 300 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 DCTN3O75935 186 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SERPINA1P01009 418 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 PAX7P23759 505 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 PUDPQ08623 228 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SPOCK1Q08629 439 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SF3A3Q12874 501 aaKnown RBP eCLIP8□□□□□ -1.132e-7■■■■■ 27.2
SUPT20H-220ENST00000490716 ACKR1Q16570 336 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ANKDD1AQ495B1 522 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ASRGL1Q7L266 308 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ZC3HAV1Q7Z2W4 902 aaKnown RBP8□□□□□ -1.13
SUPT20H-220ENST00000490716 FGFBP3Q8TAT2 258 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 TMEM239Q8WW34 195 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 APH1AQ96BI3 265 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SMURF2Q9HAU4 748 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ACTR3BQ9P1U1 418 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 MGRN1O60291 552 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SCG5P05408 212 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 NCK1P16333 377 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 FUT1P19526 365 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 GSSP48637 474 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 HIST1H3AP68431 136 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 BNIP1Q12981 228 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 BEX5Q5H9J7 111 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 HIST2H3PS2Q5TEC6 136 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SLC25A47Q6Q0C1 308 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 HIST2H3AQ71DI3 136 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 HS6ST2Q96MM7 605 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 LRRC37BQ96QE4 947 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 TRAF4Q9BUZ4 470 aaPredicted RBP8□□□□□ -1.13
SUPT20H-220ENST00000490716 MAGIXQ9H6Y5 334 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 NMNAT1Q9HAN9 279 aaPredicted RBP8□□□□□ -1.13
SUPT20H-220ENST00000490716 VNN3Q9NY84 501 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ELOA3DA6NLF2 546 aaPredicted RBP8□□□□□ -1.13
SUPT20H-220ENST00000490716 NDUFAB1O14561 156 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 RAF1P04049 648 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 CALCRP30988 508 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 RPL18Q07020 188 aaKnown RBP8□□□□□ -1.13
SUPT20H-220ENST00000490716 DEFB113Q30KQ7 82 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ELOA3BQ3SY89 546 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ANKRD16Q6P6B7 361 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ARHGAP24Q8N264 748 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ATP6V1C2Q8NEY4 427 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 NUP37Q8NFH4 326 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 ELOA3Q8NG57 546 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SEC61A2Q9H9S3 476 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 PARPBPQ9NWS1 579 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 SIGLEC7Q9Y286 467 aa8□□□□□ -1.13
SUPT20H-220ENST00000490716 TMEM129A0AVI4 362 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 TMEM247A6NEH6 219 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 SMNDC1O75940 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 LYZL6O75951 148 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 RHCEP18577 417 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 NR1H2P55055 460 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 SH3BGRP55822 239 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 ADAM8P78325 824 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 POU3F1Q03052 451 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 BSPH1Q075Z2 132 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 CHMP1BQ7LBR1 199 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 PYURFQ96I23 114 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 POLDIP3Q9BY77 421 aaKnown RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 TMEM27Q9HBJ8 222 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 ASB6Q9NWX5 421 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 MYO9AB2RTY4 2548 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 SH3PXD2BA1X283 911 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 CALB2P22676 271 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 C1orf94Q6P1W5 598 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 TBPL2Q6SJ96 375 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 CD300LDQ6UXZ3 194 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 KDM8Q8N371 416 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 MOSPD2Q8NHP6 518 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 ACOT11Q8WXI4 607 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 HDAC2Q92769 488 aaKnown RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 NEUROG1Q92886 237 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 KISS1RQ969F8 398 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 NRIP3Q9NQ35 241 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 NAV2Q8IVL1 2488 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 TCRBV3S1A0A5B6 114 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 ENO4A6NNW6 628 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 ZNF99A8MXY4 864 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 E7EQL1 145 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 SOD3P08294 240 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 COPZ1P61923 177 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 TAF11Q15544 211 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 GLYATQ6IB77 296 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 OR7E24Q6IFN5 339 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 ZNF704Q6ZNC4 412 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 C20orf204Q6ZNR8 217 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 DNAJA3Q96EY1 480 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 TSPAN32Q96QS1 320 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 MUC13Q9H3R2 512 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 DENND2DQ9H6A0 471 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 VSX1Q9NZR4 365 aaPredicted RBP7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 AMDHD2Q9Y303 409 aa7.99□□□□□ -1.13
SUPT20H-220ENST00000490716 MXRA5Q9NR99 2828 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms