RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ST13P4Q8IZP2 240 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 CLDN19Q8N6F1 224 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 FNDC5Q8NAU1 212 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR4D5Q8NGN0 318 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 RHEBL1Q8TAI7 183 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 FAM3CQ92520 227 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 CERS2Q96G23 380 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 SH3GL1Q99961 368 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 PARD6BQ9BYG5 372 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 GAL3ST2Q9H3Q3 398 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 ELOVL6Q9H5J4 265 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 NARFLQ9H6Q4 476 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 MRPS30Q9NP92 439 aaKnown RBP3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 PXMP2Q9NR77 195 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 MARCH5Q9NX47 278 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 PTTG3PQ9NZH4 202 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 CD274Q9NZQ7 290 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 CTSFQ9UBX1 484 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 RASD1Q9Y272 281 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 PLLPQ9Y342 182 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 CBY1Q9Y3M2 126 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 ATP6V1DQ9Y5K8 247 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 LRRK1Q38SD2 2015 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 INSRP06213 1382 aa3.37□□□□□ -1.87
HMGB1P38-201ENST00000490557 IGKV6D-21A0A0A0MT36 114 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 TRBV11-1A0A0K0K1C0 115 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 HAS3O00219 553 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 CBR3O75828 277 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 CDK14O94921 469 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR2F2O95006 317 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 SERPIND1P05546 499 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 EIF2S2P20042 333 aaKnown RBP3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 HMOX2P30519 316 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 RRM2P31350 389 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 CD80P33681 288 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 ATP1B3P54709 279 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 OGDHQ02218 1023 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 PAX5Q02548 391 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 RCAN2Q14206 197 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 CELF3Q5SZQ8 465 aaKnown RBP3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 ACSM5Q6NUN0 579 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 CCDC137Q6PK04 289 aaKnown RBP3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 SCD5Q86SK9 330 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 NRMQ8IXM6 262 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 TMEM104Q8NE00 496 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 PROKR2Q8NFJ6 384 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR13C9Q8NGT0 318 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 ACMSDQ8TDX5 336 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 AENQ8WTP8 325 aaKnown RBP3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 ELSPBP1Q96BH3 223 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 LRRC45Q96CN5 670 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 PELI1Q96FA3 418 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 ACBD6Q9BR61 282 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 DUSP16Q9BY84 665 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 NDEL1Q9GZM8 345 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 MFFQ9GZY8 342 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 LRRN3Q9H3W5 708 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 LY9Q9HBG7 655 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 LYRM4Q9HD34 91 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 CCNB1IP1Q9NPC3 277 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 NRBP2Q9NSY0 501 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 SLC7A8Q9UHI5 535 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 ANAPC7Q9UJX3 599 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 ZNF221Q9UK13 617 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 OARD1Q9Y530 152 aa3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
HMGB1P38-201ENST00000490557 A0A1W2PNU3 283 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 SERPINE3A8MV23 424 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 A8MXQ7 604 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 F8VZ95 297 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 H3BMQ9 156 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 RS1O15537 224 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 LRATO95237 230 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 CLDN9O95484 217 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 ATP1B2P14415 290 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 IGLL1P15814 213 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 GTF2E2P29084 291 aaKnown RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 LCN1P31025 176 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 RBMXP38159 391 aaKnown RBP3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 CRYBB2P43320 205 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 KIR2DS2P43631 304 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 BDKRB1P46663 353 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 GYG1P46976 350 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 ACLYP53396 1101 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 PSG7Q13046 419 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 ILKQ13418 452 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 SFT2D3Q587I9 215 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 GPR157Q5UAW9 335 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 SLC8B1Q6J4K2 584 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 ARCQ7LC44 396 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 DHDDSQ86SQ9 333 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 CCDC50Q8IVM0 306 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 SKA3Q8IX90 412 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 CLEC4FQ8N1N0 589 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 PQLC3Q8N755 202 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 MFSD9Q8NBP5 474 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR7G2Q8NG99 324 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR4A15Q8NGL6 344 aa3.35□□□□□ -1.87
HMGB1P38-201ENST00000490557 OR1F12Q8NHA8 337 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms