RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 BLOC1S5-TXNDC5H3BN57 136 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 ARPC2O15144 300 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 PRSS23O95084 383 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 RAF1P04049 648 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 CDH2P19022 906 aaPredicted RBP15.23■□□□□ 0.03
MDC1-206ENST00000489540 PAX7P23759 505 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 SH3BGRP55822 239 aaPredicted RBP15.23■□□□□ 0.03
MDC1-206ENST00000489540 PRPS1P60891 318 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 ROR2Q01974 943 aaKnown RBP15.23■□□□□ 0.03
MDC1-206ENST00000489540 LGALS3BPQ08380 585 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 KEAP1Q14145 624 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 SEZ6L2Q6UXD5 910 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 ZNF704Q6ZNC4 412 aaPredicted RBP15.23■□□□□ 0.03
MDC1-206ENST00000489540 RINLQ6ZS11 566 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 CDK20Q8IZL9 346 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 WDR31Q8NA23 367 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 OR52N5Q8NH56 324 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 OR6X1Q8NH79 312 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 ACOT11Q8WXI4 607 aaPredicted RBP15.23■□□□□ 0.03
MDC1-206ENST00000489540 BPIFA2Q96DR5 249 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 C7orf34Q96L11 122 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 ALKBH3Q96Q83 286 aaPredicted RBP15.23■□□□□ 0.03
MDC1-206ENST00000489540 EMC6Q9BV81 110 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 OBP2BQ9NPH6 170 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 B3GAT2Q9NPZ5 323 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 MAN2C1Q9NTJ4 1040 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 PLEKHA6Q9Y2H5 1048 aa15.23■□□□□ 0.03
MDC1-206ENST00000489540 MAGED1Q9Y5V3 778 aaPredicted RBP15.23■□□□□ 0.03
MDC1-206ENST00000489540 SERPINI2O75830 405 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 WNT11O96014 354 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 CD3EP07766 207 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 IFI30P13284 250 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 HOXB1P14653 301 aaPredicted RBP15.22■□□□□ 0.03
MDC1-206ENST00000489540 IFNGR1P15260 489 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 IST1P53990 364 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 ACKR1Q16570 336 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 ANKRD16Q6P6B7 361 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 KLHL17Q6TDP4 642 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 KLHL24Q6TFL4 600 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 ZNF730Q6ZMV8 503 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 SLC35D2Q76EJ3 337 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 LINGO2Q7L985 606 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 RRM2BQ7LG56 351 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 TSEN54Q7Z6J9 526 aaKnown RBP15.22■□□□□ 0.03
MDC1-206ENST00000489540 OR1K1Q8NGR3 316 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 MAGEE2Q8TD90 523 aaPredicted RBP15.22■□□□□ 0.03
MDC1-206ENST00000489540 MCUR1Q96AQ8 359 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 CRLF2Q9HC73 371 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 GPR35Q9HC97 309 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 ACTR3BQ9P1U1 418 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 RNF115Q9Y4L5 304 aa15.22■□□□□ 0.03
MDC1-206ENST00000489540 CSMD1Q96PZ7 3565 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 A0A087WUU8 490 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 A0A1W2PRQ8 180 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 DPRXA6NFQ7 191 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 ATE1O95260 518 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 BCL10O95999 233 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 H1F0P07305 194 aaKnown RBP15.21■□□□□ 0.03
MDC1-206ENST00000489540 TSPAN19P0C672 248 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 BIDP55957 195 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 PRKCDQ05655 676 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 DGCR6Q14129 220 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 CARD17Q5XLA6 110 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 TMEM108Q6UXF1 575 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 MBOAT2Q6ZWT7 520 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 NRMQ8IXM6 262 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 FAM86B1Q8N7N1 296 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 OR6N1Q8NGY5 312 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 BCL2L2Q92843 193 aaPredicted RBP15.21■□□□□ 0.03
MDC1-206ENST00000489540 MBD6Q96DN6 1003 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 RADILQ96JH8 1075 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 MUC13Q9H3R2 512 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 CCM2LQ9NUG4 571 aaPredicted RBP15.21■□□□□ 0.03
MDC1-206ENST00000489540 TAS2R1Q9NYW7 299 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 PRPF19Q9UMS4 504 aaKnown RBP15.21■□□□□ 0.03
MDC1-206ENST00000489540 MGAT4BQ9UQ53 548 aa15.21■□□□□ 0.03
MDC1-206ENST00000489540 A0A1W2PR80 420 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 A0A1W2PRG6 482 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 M0R3G1 203 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 FUT4P22083 530 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 PTAFRP25105 342 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 AQP2P41181 271 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 SMIM11AP58511 58 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 UBE2NP61088 152 aaKnown RBP15.2■□□□□ 0.02
MDC1-206ENST00000489540 ARF1P84077 181 aaKnown RBP15.2■□□□□ 0.02
MDC1-206ENST00000489540 RPL18Q07020 188 aaKnown RBP15.2■□□□□ 0.02
MDC1-206ENST00000489540 BSPH1Q075Z2 132 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 CAMK2DQ13557 499 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 ANKDD1AQ495B1 522 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 ADAM5Q6NVV9 412 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 C20orf204Q6ZNR8 217 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 POP5Q969H6 163 aaKnown RBP15.2■□□□□ 0.02
MDC1-206ENST00000489540 PIP5K1AQ99755 562 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 UBTD1Q9HAC8 227 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 MOV10Q9HCE1 1003 aaKnown RBP15.2■□□□□ 0.02
MDC1-206ENST00000489540 INIPQ9NRY2 104 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 NPAP1Q9NZP6 1156 aa15.2■□□□□ 0.02
MDC1-206ENST00000489540 hCG_2039718K7EN88 272 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 CLOCKO15516 846 aa15.19■□□□□ 0.02
MDC1-206ENST00000489540 PIP5K1CO60331 668 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms