RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 LAX1Q8IWV1 398 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 C9orf40Q8IXQ3 194 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 TMEM99Q8N816 258 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 NPEPL1Q8NDH3 523 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 OR2T4Q8NH00 348 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 RPS4Y2Q8TD47 263 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 STK35Q8TDR2 534 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 DOK4Q8TEW6 326 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 HIST1H2ACQ93077 130 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 TMEM203Q969S6 136 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 NACC2Q96BF6 587 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 EFHD2Q96C19 240 aaPredicted RBP7.68□□□□□ -1.18
VTI1A-207ENST00000489357 ZC3HAV1LQ96H79 300 aaKnown RBP7.68□□□□□ -1.18
VTI1A-207ENST00000489357 DIRAS2Q96HU8 199 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 SDHCQ99643 169 aaPredicted RBP7.68□□□□□ -1.18
VTI1A-207ENST00000489357 SOSTQ9BQB4 213 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 TMED9Q9BVK6 235 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 NUDT9Q9BW91 350 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 HCAR1Q9BXC0 346 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 TBL1XR1Q9BZK7 514 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 B3GNT4Q9C0J1 378 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 NRSN2Q9GZP1 204 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 VN1R1Q9GZP7 353 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 SLC22A4Q9H015 551 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 SLC26A1Q9H2B4 701 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 OR51V1Q9H2C8 321 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 TPK1Q9H3S4 243 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 SRA1Q9HD15 236 aaKnown RBP7.68□□□□□ -1.18
VTI1A-207ENST00000489357 ABCB9Q9NP78 766 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 NXT1Q9UKK6 140 aaKnown RBP7.68□□□□□ -1.18
VTI1A-207ENST00000489357 ITGB1BP2Q9UKP3 347 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 IER3IP1Q9Y5U9 82 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 TMEM14AQ9Y6G1 99 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 MAU2Q9Y6X3 613 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 CACNA1BQ00975 2339 aa7.68□□□□□ -1.18
VTI1A-207ENST00000489357 TRAV36DV7A0A075B6V5 113 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 CENPBD1B2RD01 187 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF879B4DU55 563 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 D6RAR5 112 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 TMCC2O75069 709 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 REM1O75628 298 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF432O94892 652 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 DLGAP3O95886 979 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 IGHMP01871 453 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 GP1BBP13224 206 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SPI1P17947 270 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 CXCR1P25024 350 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 RBMS1P29558 406 aaKnown RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 TALDO1P37837 337 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 OR1D4P47884 311 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 EVX1P49640 407 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 TMED10P49755 219 aaKnown RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SEPHS1P49903 392 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 PSMD7P51665 324 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 POLR2HP52434 150 aaKnown RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SIRPAP78324 504 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF85Q03923 595 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 TRA2AQ13595 282 aaKnown RBP eCLIP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 DNASE1L3Q13609 305 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 IL11RAQ14626 422 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 CDK5R1Q15078 307 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 CD226Q15762 336 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SGCBQ16585 318 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ALG10Q5BKT4 473 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 FAM69AQ5T7M9 428 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 FAAH2Q6GMR7 532 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SLC16A9Q7RTY1 509 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 OVCH1Q7RTY7 1134 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 MAMDC2Q7Z304 686 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 GRINAQ7Z429 371 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 NANOGNBQ7Z5D8 188 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 JAZF1Q86VZ6 243 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SLC35F2Q8IXU6 374 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SHISA5Q8N114 240 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 CADM3Q8N126 398 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 LRRC75AQ8NAA5 344 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SYT14Q8NB59 555 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 OR5L2Q8NGL0 311 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF563Q8TA94 476 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ABHD4Q8TB40 342 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SNX33Q8WV41 574 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 RNF138Q8WVD3 245 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ST8SIA1Q92185 356 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 TSLPQ969D9 159 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 OMA1Q96E52 524 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 LIN37Q96GY3 246 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 C4orf36Q96KX1 117 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 PGLYRP3Q96LB9 341 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 GFM1Q96RP9 751 aaKnown RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ADOQ96SZ5 270 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ATF6BQ99941 703 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 YIPF2Q9BWQ6 316 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 HDHD5Q9BXW7 423 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 SLC7A5P2Q9GIP4 190 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 MIXL1Q9H2W2 232 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ZCCHC4Q9H5U6 513 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 PPP1R3EQ9H7J1 279 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ISG20L2Q9H9L3 353 aaKnown RBP7.67□□□□□ -1.18
VTI1A-207ENST00000489357 ABRACLQ9P1F3 81 aa7.67□□□□□ -1.18
VTI1A-207ENST00000489357 DHCR7Q9UBM7 475 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms