RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 IDH2P48735 452 aaKnown RBP9.63□□□□□ -0.87
HDAC6-233ENST00000489352 POLR2HP52434 150 aaKnown RBP9.63□□□□□ -0.87
HDAC6-233ENST00000489352 CLDN17P56750 224 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 FGF12P61328 243 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 FASTKD3Q14CZ7 662 aaKnown RBP9.63□□□□□ -0.87
HDAC6-233ENST00000489352 RASA2Q15283 850 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 IMPG1Q17R60 797 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 ZBTB37Q5TC79 503 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 LRRC28Q86X40 367 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-233ENST00000489352 SPERTQ8NA61 448 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 SCCPDHQ8NBX0 429 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 BHLHE22Q8NFJ8 381 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-233ENST00000489352 PYROXD1Q8WU10 500 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 CNTD2Q9H8S5 307 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 SH3BP4Q9P0V3 963 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 FBLN5Q9UBX5 448 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 RPUSD1Q9UJJ7 312 aaKnown RBP9.63□□□□□ -0.87
HDAC6-233ENST00000489352 FOXJ3Q9UPW0 622 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 FAM96BQ9Y3D0 163 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 GPR45Q9Y5Y3 372 aa9.63□□□□□ -0.87
HDAC6-233ENST00000489352 NUP214P35658 2090 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-233ENST00000489352 KIR2DS1A0A191URI9 304 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 TMEM72A0PK05 275 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 NPIPB9F8W1W9 429 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 MGRN1O60291 552 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 URI1O94763 535 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-233ENST00000489352 IGHV1-46P01743 117 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF43P17038 809 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 LMO1P25800 156 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 CRHR1P34998 444 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 MAP2K6P52564 334 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 BTG1P62324 171 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 TP53BP2Q13625 1128 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 RAB39AQ14964 217 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 ARHGAP11BQ3KRB8 267 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 CLEC6AQ6EIG7 209 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 ANKRD26P1Q6NSI1 321 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF813Q6ZN06 617 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 DDIASQ8IXT1 998 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 MUC20Q8N307 709 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-233ENST00000489352 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 NUDT16L1Q9BRJ7 211 aaKnown RBP9.62□□□□□ -0.87
HDAC6-233ENST00000489352 RNF121Q9H920 327 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 CDH20Q9HBT6 801 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 SIRT5Q9NXA8 310 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 RASD1Q9Y272 281 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 SLC35A3Q9Y2D2 325 aa9.62□□□□□ -0.87
HDAC6-233ENST00000489352 POLR3HQ9Y535 204 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-233ENST00000489352 LIPT2A6NK58 231 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 TM9SF1O15321 606 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 UBL3O95164 117 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 C2P06681 752 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 RBP1P09455 135 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
HDAC6-233ENST00000489352 SSTR1P30872 391 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 SPDYE7PQ495Y7 208 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 PIWIL3Q7Z3Z3 882 aaKnown RBP9.61□□□□□ -0.87
HDAC6-233ENST00000489352 EPHX4Q8IUS5 362 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 ARFGAP2Q8N6H7 521 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 PIK3C3Q8NEB9 887 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 Q8NFD4 153 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 GEMIN6Q8WXD5 167 aaKnown RBP9.61□□□□□ -0.87
HDAC6-233ENST00000489352 DPF1Q92782 380 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 PPCDCQ96CD2 204 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF837Q96EG3 531 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-233ENST00000489352 FAM120BQ96EK7 910 aaKnown RBP9.61□□□□□ -0.87
HDAC6-233ENST00000489352 MS4A14Q96JA4 679 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 BCL2L14Q9BZR8 327 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 TMEM106BQ9NUM4 274 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 POFUT2Q9Y2G5 429 aa9.61□□□□□ -0.87
HDAC6-233ENST00000489352 ZC3H12DA2A288 527 aaKnown RBP9.6□□□□□ -0.87
HDAC6-233ENST00000489352 F5H0A9 414 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-233ENST00000489352 RNASEK-C17orf49H0YIS7 233 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 M0R3G1 203 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 P2RY10O00398 339 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 SERPINA5P05154 406 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 WNT2P09544 360 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 VSIG10L2P0DP72 767 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 CPT2P23786 658 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 CXCR1P25024 350 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 TACR3P29371 465 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 MDH2P40926 338 aaKnown RBP9.6□□□□□ -0.87
HDAC6-233ENST00000489352 ETV4P43268 484 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 PAX2Q02962 417 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 C1DQ13901 141 aaKnown RBP9.6□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF141Q15928 474 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 FAM219BQ5XKK7 198 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 C1orf122Q6ZSJ8 110 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 SNX32Q86XE0 403 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 RNF130Q86XS8 419 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 LDLRAD3Q86YD5 345 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 SLC30A7Q8NEW0 376 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 ZNF483Q8TF39 744 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-233ENST00000489352 IPCEF1Q8WWN9 437 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-233ENST00000489352 GPR78Q96P69 363 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 SDF2Q99470 211 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 PRPF18Q99633 342 aaKnown RBP9.6□□□□□ -0.87
HDAC6-233ENST00000489352 SLC19A3Q9BZV2 496 aa9.6□□□□□ -0.87
HDAC6-233ENST00000489352 LRMDAQ9H2I8 198 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms