RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CLEC2AQ6UVW9 174 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 LINC00114Q6XXX2 140 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 RBM45Q8IUH3 476 aaKnown RBP9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 UEVLDQ8IX04 471 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 GPR137CQ8N3F9 429 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 FAM169BQ8N8A8 192 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 PIK3C3Q8NEB9 887 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 C10orf105Q8TEF2 133 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 SIKE1Q9BRV8 207 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF426Q9BUY5 554 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 TMEM120AQ9BXJ8 343 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 EVA1AQ9H8M9 152 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MED29Q9NX70 200 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MRPL39Q9NYK5 338 aaKnown RBP9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF224Q9NZL3 707 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 NDUFAF1Q9Y375 327 aa9.74□□□□□ -0.85
RAB11FIP3-210ENST00000487899 CPSF4LA6NMK7 179 aaKnown RBP9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF99A8MXY4 864 aaPredicted RBP9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 AKAP8O43823 692 aaKnown RBP9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 PDE5AO76074 875 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 CRYAAP02489 173 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 NQO1P15559 274 aaKnown RBP9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 IDH3GP51553 393 aaPredicted RBP9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 EFNA4P52798 201 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 HGFACQ04756 655 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 LOXL1Q08397 574 aaPredicted RBP9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 C1DQ13901 141 aaKnown RBP9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 NFYCQ13952 458 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MFSD13AQ14CX5 517 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 EFNB3Q15768 340 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 TMEM249Q2WGJ8 235 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ENTPD8Q5MY95 495 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 C6orf52Q5T4I8 152 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF613Q6PF04 617 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF627Q7L945 461 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MDP1Q86V88 176 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 C20orf196Q8IYI0 205 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ADAMTS16Q8TE57 1224 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 FBXO17Q96EF6 278 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 TXNDC15Q96J42 360 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF75AQ96N20 296 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 EPYCQ99645 322 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MCHR1Q99705 422 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MDFIQ99750 246 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 RHNO1Q9BSD3 238 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 EMC6Q9BV81 110 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ASPNQ9BXN1 380 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 PCDHAC1Q9H158 963 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 TMEM27Q9HBJ8 222 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 SLC13A4Q9UKG4 626 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 STAB1Q9NY15 2570 aa9.73□□□□□ -0.85
RAB11FIP3-210ENST00000487899 IGHV2OR16-5A0A0B4J2B6 119 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 VWC2LB2RUY7 222 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 M0R3G1 203 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 PLPP3O14495 311 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 TLX2O43763 284 aaPredicted RBP9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MT-ATP6P00846 226 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 C8BP07358 591 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 IGFBP1P08833 259 aaPredicted RBP9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 CSF3P09919 207 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 B4GALT1P15291 398 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 SLC25A16P16260 332 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 DSCR9P59020 149 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 SNRPD2P62316 118 aaKnown RBP9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 VLDLRP98155 873 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 IL1RL1Q01638 556 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 CHRNB3Q05901 458 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 RAB35Q15286 201 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF74Q16587 644 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 VMACQ2NL98 169 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 RABL3Q5HYI8 236 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 CARD17Q5XLA6 110 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 CALHM3Q86XJ0 350 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 SLC30A8Q8IWU4 369 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ANKS4BQ8N8V4 417 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 NUP37Q8NFH4 326 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 OR5J2Q8NH18 312 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 OR10A6Q8NH74 314 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 VANGL1Q8TAA9 524 aaPredicted RBP9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 RNF217Q8TC41 542 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 FAM168AQ92567 244 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 KCNS3Q9BQ31 491 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 PLK3Q9H4B4 646 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ZNF442Q9H7R0 627 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 MOV10Q9HCE1 1003 aaKnown RBP9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 ARGLU1Q9NWB6 273 aaPredicted RBP9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 B3GNT2Q9NY97 397 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 USP22Q9UPT9 525 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 NOX1Q9Y5S8 564 aa9.72□□□□□ -0.85
RAB11FIP3-210ENST00000487899 SLC35F4A4IF30 521 aa9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 M0QX08 132 aa9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 KPNA4O00629 521 aaPredicted RBP9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 F12P00748 615 aaPredicted RBP9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 HLA-HP01893 362 aa9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 TP53P04637 393 aaPredicted RBP9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 OR4A8P0C604 315 aa9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 HOXB1P14653 301 aaPredicted RBP9.71□□□□□ -0.86
RAB11FIP3-210ENST00000487899 CBR1P16152 277 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms