RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 FITM1A5D6W6 292 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ELOA3DA6NLF2 546 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 PPP3CBP16298 524 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ZNF28P17035 718 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 TYRP1P17643 537 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 SPI1P17947 270 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 PPP2CBP62714 309 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 PPP2CAP67775 309 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 MAT1AQ00266 395 aaKnown RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 TFF2Q03403 129 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ELOA3BQ3SY89 546 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 FCRL6Q6DN72 434 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 RHOUQ7L0Q8 258 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 CBLN2Q8IUK8 224 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ELOA3Q8NG57 546 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 TSEN15Q8WW01 171 aaKnown RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 COX14Q96I36 57 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 SLC38A3Q99624 504 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ZCCHC4Q9H5U6 513 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 A0A1B0GUH1 482 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ATG12O94817 140 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 SERPINA3P01011 423 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 IGKV1D-16P01601 117 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 CCKBRP32239 447 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 CDKN2AP42771 156 aaKnown RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 MC2RQ01718 297 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 DPTQ07507 201 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 DUSP8Q13202 625 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 DYRK1AQ13627 763 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 PDGFRLQ15198 375 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ARHGAP11BQ3KRB8 267 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ENPP7Q6UWV6 458 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 BVESQ8NE79 360 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 FGF13Q92913 245 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.31□□□□□ -0.62e-12■■□□□ 13.6
HSPG2-211ENST00000486901 SLC22A13Q9Y226 551 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 CNOT1A5YKK6 2376 aaKnown RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 A0A1W2PQU0 124 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 DCDC2BA2VCK2 349 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 AIPO00170 330 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ERGP11308 486 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 MDGA2Q7Z553 956 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 OR4C3Q8NH37 302 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 MRPS24Q96EL2 167 aaKnown RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 AMELYQ99218 206 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 TINAGL1Q9GZM7 467 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 PRR13Q9NZ81 148 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 MED11Q9P086 117 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 CGGBP1Q9UFW8 167 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-211ENST00000486901 THSD7BQ9C0I4 1608 aa11.31□□□□□ -0.6
HSPG2-211ENST00000486901 GALR3O60755 368 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-211ENST00000486901 RNGTTO60942 597 aaKnown RBP11.3□□□□□ -0.6
HSPG2-211ENST00000486901 PTP4A3O75365 173 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 RDH16O75452 317 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 LYPD3O95274 346 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 TGM6O95932 706 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ADH1CP00326 375 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 CEACAM5P06731 702 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 DBIP07108 87 aaKnown RBP11.3□□□□□ -0.6
HSPG2-211ENST00000486901 TNFRSF17Q02223 184 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 EIPR1Q53HC9 387 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ZNF626Q68DY1 528 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 KCTD9Q7L273 389 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ZNF546Q86UE3 836 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 BPIFCQ8NFQ6 507 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 OR2AK2Q8NG84 335 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ALG12Q9BV10 488 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 POFUT1Q9H488 388 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 TAS2R5Q9NYW4 299 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 B3GALT2O43825 422 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 TLX1P31314 330 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-211ENST00000486901 RAP2BP61225 183 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 TRA2BP62995 288 aaKnown RBP11.3□□□□□ -0.6
HSPG2-211ENST00000486901 TDGQ13569 410 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 RPL22L1Q6P5R6 122 aaKnown RBP11.3□□□□□ -0.6
HSPG2-211ENST00000486901 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 BIVMQ86UB2 503 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 OR5AK2Q8NH90 309 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 FAM46BQ96A09 425 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ZNF416Q9BWM5 594 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 PBX4Q9BYU1 374 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ZNF350Q9GZX5 532 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 PCDHB16Q9NRJ7 776 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ATXN7L1Q9ULK2 861 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ZNF281Q9Y2X9 895 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
HSPG2-211ENST00000486901 ANKRD20A5PA0PJZ0 165 aa11.29□□□□□ -0.6
HSPG2-211ENST00000486901 C1QTNF3-AMACRE9PGA6 284 aa11.29□□□□□ -0.6
HSPG2-211ENST00000486901 ALOX12BO75342 701 aa11.29□□□□□ -0.6
HSPG2-211ENST00000486901 HTRA4P83105 476 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-211ENST00000486901 ARHGAP40Q5TG30 622 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms