RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MAGEE2Q8TD90 523 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-225ENST00000483506 BCAS4Q8TDM0 211 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 C7orf34Q96L11 122 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 FOXC2Q99958 501 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 FNDC11Q9BVV2 318 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 CXXC4Q9H2H0 198 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 OBP2BQ9NPH6 170 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 AMDHD2Q9Y303 409 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 SLC35F4A4IF30 521 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 DPRXA6NFQ7 191 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 ARPC2O15144 300 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 OR6A2O95222 327 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 HIST1H2ABP04908 130 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 CD53P19397 219 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 FUT1P19526 365 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 TCN1P20061 433 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-225ENST00000483506 AHCYP23526 432 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 YAP1P46937 504 aaKnown RBP15.78■□□□□ 0.12
HDAC6-225ENST00000483506 ROR2Q01974 943 aaKnown RBP15.78■□□□□ 0.12
HDAC6-225ENST00000483506 BSPH1Q075Z2 132 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 ACKR1Q16570 336 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 C20orf204Q6ZNR8 217 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 HIST3H2AQ7L7L0 130 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 NANOGNBQ7Z5D8 188 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 WDFY1Q8IWB7 410 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 RNF113BQ8IZP6 322 aaKnown RBP15.78■□□□□ 0.12
HDAC6-225ENST00000483506 FAM86B1Q8N7N1 296 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 OR52N5Q8NH56 324 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 ACOT11Q8WXI4 607 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-225ENST00000483506 HIST1H2ACQ93077 130 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 TXNDC15Q96J42 360 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 ADAD1Q96M93 576 aaKnown RBP15.78■□□□□ 0.12
HDAC6-225ENST00000483506 NELFAQ9H3P2 528 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 GPR35Q9HC97 309 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 MED29Q9NX70 200 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 NDUFAF4Q9P032 175 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 RNF115Q9Y4L5 304 aa15.78■□□□□ 0.12
HDAC6-225ENST00000483506 PRRC2AP48634 2157 aaKnown RBP15.77■□□□□ 0.12
HDAC6-225ENST00000483506 ARPC4-TTLL3A0A0A6YYG9 625 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 C11orf98E9PRG8 122 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 PLAUP00749 431 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 CD3EP07766 207 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 UMPSP11172 480 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 HOXB1P14653 301 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-225ENST00000483506 IFNGR1P15260 489 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 RHCEP18577 417 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 PAX7P23759 505 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 IQCCQ4KMZ1 466 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 HMBOX1Q6NT76 420 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 CYP4Z1Q86W10 505 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 GPR137CQ8N3F9 429 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 OR6X1Q8NH79 312 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 IGFBPL1Q8WX77 278 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 BCL2L2Q92843 193 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-225ENST00000483506 PYURFQ96I23 114 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 DHRS1Q96LJ7 313 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 NSMCE2Q96MF7 247 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 ALPK1Q96QP1 1244 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 EMC6Q9BV81 110 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 C1orf21Q9H246 121 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 NMNAT1Q9HAN9 279 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-225ENST00000483506 CCM2LQ9NUG4 571 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-225ENST00000483506 RHCGQ9UBD6 479 aa15.77■□□□□ 0.12
HDAC6-225ENST00000483506 MAGED1Q9Y5V3 778 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-225ENST00000483506 PLCE1Q9P212 2302 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 A0A1W2PRQ8 180 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 NPIPB13A6NJU9 1138 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 NPIPB4C9JG80 1138 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 HS3ST1O14792 307 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 RNF13O43567 381 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 PIP5K1CO60331 668 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 HOXC12P31275 282 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 MSX2P35548 267 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-225ENST00000483506 PRPS1P60891 318 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 RPS4XP62701 263 aaKnown RBP15.76■□□□□ 0.11
HDAC6-225ENST00000483506 LSM11P83369 360 aaKnown RBP eCLIP15.76■□□□□ 0.11
HDAC6-225ENST00000483506 VLDLRP98155 873 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 PRKCDQ05655 676 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 RPL18Q07020 188 aaKnown RBP15.76■□□□□ 0.11
HDAC6-225ENST00000483506 DGCR6Q14129 220 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 KEAP1Q14145 624 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 TBRG1Q3YBR2 411 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 HIKESHIQ53FT3 197 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 PHYHD1Q5SRE7 291 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 ALKBH2Q6NS38 261 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 ANKRD16Q6P6B7 361 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 KLHL17Q6TDP4 642 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 SPNS3Q6ZMD2 512 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 RINLQ6ZS11 566 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 MBOAT2Q6ZWT7 520 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 SLC35D2Q76EJ3 337 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 ZNF627Q7L945 461 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 TRPM8Q7Z2W7 1104 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 NRMQ8IXM6 262 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 LILRB1Q8NHL6 650 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-225ENST00000483506 BPIFA2Q96DR5 249 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 PIP5K1AQ99755 562 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 MUC13Q9H3R2 512 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 UBTD1Q9HAC8 227 aa15.76■□□□□ 0.11
HDAC6-225ENST00000483506 CRLF2Q9HC73 371 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms