RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	SLC25A35	Q3KQZ1	300 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	FAM205BP	Q63HN1	556 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	KDM4D	Q6B0I6	523 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	GPR139	Q6DWJ6	353 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	PLXDC2	Q6UX71	529 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	SLC35D2	Q76EJ3	337 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	AAED1	Q7RTV5	226 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	NAXE	Q8NCW5	288 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	OR13C2	Q8NGS9	318 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	OR6X1	Q8NH79	312 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	FNDC8	Q8TC99	324 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	GTPBP3	Q969Y2	492 aa	Known RBP	13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	STARD4	Q96DR4	205 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	LRR1	Q96L50	414 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	NIPSNAP1	Q9BPW8	284 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	OR52D1	Q9H346	318 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	MCCC2	Q9HCC0	563 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	USE1	Q9NZ43	259 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	BAIAP2	Q9UQB8	552 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	CDH10	Q9Y6N8	788 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	PCNX1	Q96RV3	2341 aa		13.62	□□□□□ -0.23
CCM2-215	ENST00000482714	C11orf98	E9PRG8	122 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	MSTN	O14793	375 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	CASQ2	O14958	399 aa	Predicted RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	TRAF3IP2	O43734	574 aa	Predicted RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	CGA	P01215	116 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	RPL4	P36578	427 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	DAP	P51397	102 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	RPS6KA3	P51812	740 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ESRRG	P62508	458 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ADORA2A-AS1	P86434	159 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	PPP2R2B	Q00005	443 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	IL1RL1	Q01638	556 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	POU3F1	Q03052	451 aa	Predicted RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	SLC34A1	Q06495	639 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	FOXF2	Q12947	444 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF620	Q6ZNG0	422 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ZBTB49	Q6ZSB9	765 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	HS3ST5	Q8IZT8	346 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	GCNT2	Q8N0V5	402 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	CNEP1R1	Q8N9A8	125 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	POMGNT2	Q8NAT1	580 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	OR52L1	Q8NGH7	329 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	MOSPD2	Q8NHP6	518 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	EME1	Q96AY2	570 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	RNPEPL1	Q9HAU8	725 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	KIF17	Q9P2E2	1029 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	REV1	Q9UBZ9	1251 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	PROCR	Q9UNN8	238 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	RRP15	Q9Y3B9	282 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	DIDO1	Q9BTC0	2240 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714		A6NIZ1	184 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	PYCARD-AS1	I3L0S3	204 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF432	O94892	652 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	TXNDC12	O95881	172 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	F13B	P05160	661 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	HLA-DOB	P13765	273 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	IFNGR1	P15260	489 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	OR3A2	P47893	321 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ALDH3A2	P51648	485 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	CLDN17	P56750	224 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	RAP1B	P61224	184 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	RPL27	P61353	136 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	RAP1A	P62834	184 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	DAG1	Q14118	895 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ARMC4	Q5T2S8	1044 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	KLHL17	Q6TDP4	642 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	BEND4	Q6ZU67	534 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	MRGPRG	Q86SM5	289 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	MEX3D	Q86XN8	651 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	APH1A	Q96BI3	265 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	LRRC46	Q96FV0	321 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	SLC25A44	Q96H78	314 aa	Predicted RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF385A	Q96PM9	386 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	TEX12	Q9BXU0	123 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	LINC00470	Q9BZP3	86 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	KRT84	Q9NSB2	600 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	JKAMP	Q9P055	326 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	GRHPR	Q9UBQ7	328 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	CLEC4A	Q9UMR7	237 aa		13.61	□□□□□ -0.23
CCM2-215	ENST00000482714	KIAA1549	Q9HCM3	1950 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ALPK2	Q86TB3	2170 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	INTS1	Q8N201	2190 aa	Known RBP	13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	SLC35F4	A4IF30	521 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ALPL	P05186	524 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	NR2C1	P13056	603 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	CDH2	P19022	906 aa	Predicted RBP	13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	GIPR	P48546	466 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	RAD23A	P54725	363 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	FXYD6P3	P58550	94 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ACKR1	Q16570	336 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	NUFIP2	Q7Z417	695 aa	Known RBP	13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	BTLA	Q7Z6A9	289 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ZNF100	Q8IYN0	542 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	PACRGL	Q8N7B6	248 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	ARIH2OS	Q8N7S6	290 aa		13.6	□□□□□ -0.23
CCM2-215	ENST00000482714	FANK1	Q8TC84	345 aa		13.6	□□□□□ -0.23

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