RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZC4H2Q9NQZ6 224 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 FBXO8Q9NRD0 319 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 NYAP2Q9P242 653 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 B4GALT7Q9UBV7 327 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SMPXQ9UHP9 88 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 PDE10AQ9Y233 779 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 YARS2Q9Y2Z4 477 aaKnown RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 NDUFAF1Q9Y375 327 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 ZNF337Q9Y3M9 751 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 SPIN1Q9Y657 262 aaPredicted RBP3.59□□□□□ -1.83
VPS41-212ENST00000482217 CCDC171Q6TFL3 1326 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 ADGRA3Q8IWK6 1321 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 MTUS2Q5JR59 1369 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 RAB3GAP2Q9H2M9 1393 aa3.59□□□□□ -1.83
VPS41-212ENST00000482217 NUP160Q12769 1436 aa3.59□□□□□ -1.84
VPS41-212ENST00000482217 hCG_38984A0A1B0GV85 526 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 A0A1B0GVI7 797 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 A0A1W2PP11 408 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GOLGA6L9A6NEM1 432 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 SERINC4A6NH21 518 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF98A6NK75 572 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 C9J4A7 227 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 G3V4G9 280 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 BLOC1S5-TXNDC5H3BN57 136 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 M0QZ92 97 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF195O14628 629 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PRMT5O14744 637 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 ARPC1BO15143 372 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 ARPC5O15511 151 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF749O43361 778 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 RGS14O43566 566 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ITM2AO43736 263 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 DPM1O60762 260 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 NOS1APO75052 506 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 HSBP1O75506 76 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PLEKHA8P1O95397 391 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 TOMM40O96008 361 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CD74P04233 296 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CD5P06127 495 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CDK1P06493 297 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CRHP06850 196 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 SP1P08047 785 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 OCM2P0CE71 109 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF12P17014 697 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PGCP20142 388 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 HOXD3P31249 432 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 TIMP3P35625 211 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 RPL13AP40429 203 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 MAGEA3P43357 314 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 QARSP47897 775 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 TMED10P49755 219 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 DAP3P51398 398 aaKnown RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 VAMP7P51809 220 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 TAS2R60P59551 318 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 KRTAP10-11P60412 298 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF45Q02386 682 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 TLE4Q04727 773 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 FCHO2Q0JRZ9 810 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ILF3Q12906 894 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS41-212ENST00000482217 MLLT11Q13015 90 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GPR50Q13585 617 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GRB7Q14451 532 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 MESDQ14696 234 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 SMCO1Q147U7 214 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 EMC2Q15006 297 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PSG5Q15238 335 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 OR1C1Q15619 314 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ODF3L2Q3SX64 289 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 SLC25A52Q3SY17 297 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GAGE2EQ4V326 116 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 ZNF658BQ4V348 819 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 ACSM3Q53FZ2 586 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 RAB6CQ53S08 254 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PPM1LQ5SGD2 360 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 SAXO2Q658L1 398 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 LRRC31Q6UY01 552 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 DLK2Q6UY11 383 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 NPSR1Q6W5P4 371 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 TMEM184AQ6ZMB5 413 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CYS1Q717R9 158 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 Q71RC1 249 aaPredicted RBP3.58□□□□□ -1.84
VPS41-212ENST00000482217 OR2W3Q7Z3T1 314 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 MOB3BQ86TA1 216 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PRUNE1Q86TP1 453 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 TMEM17Q86X19 198 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 LGI2Q8N0V4 545 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CATSPER1Q8NEC5 780 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 OR10A7Q8NGE5 316 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 OR9A4Q8NGU2 314 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 LYPD6BQ8NI32 183 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 PIGXQ8TBF5 258 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 CD99L2Q8TCZ2 262 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 GPR148Q8TDV2 347 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 APH1BQ8WW43 257 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 RASSF5Q8WWW0 418 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 MAFIPQ8WZ33 124 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 OR5P2Q8WZ92 322 aa3.58□□□□□ -1.84
VPS41-212ENST00000482217 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms