RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 SPATA9Q9BWV2 254 aa8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 SUCNR1Q9BXA5 334 aa8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 TPK1Q9H3S4 243 aa8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 WDR55Q9H6Y2 383 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 NOX3Q9HBY0 568 aa8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 CRLF2Q9HC73 371 aa8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 CALML5Q9NZT1 146 aa8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 PCDHB14Q9Y5E9 798 aa8.11□□□□□ -1.11
SMARCE1-210ENST00000481231 M0R082 166 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 TM9SF1O15321 606 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 RGS16O15492 202 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 TRAF3IP2O43734 574 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 HLA-HP01893 362 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 NR4A1P22736 598 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 GTF2E2P29084 291 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 RPS5P46782 204 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 CAPZA2P47755 286 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 DSTNP60981 165 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 C1DQ13901 141 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 DAG1Q14118 895 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 KRT80Q6KB66 452 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 C6orf89Q6UWU4 347 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 PIK3C3Q8NEB9 887 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 IL17RDQ8NFM7 739 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 ZNF417Q8TAU3 575 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 C22orf15Q8WYQ4 148 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 TAAR8Q969N4 342 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 MS4A3Q96HJ5 214 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 OXGR1Q96P68 337 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 LRRC37BQ96QE4 947 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 ZNF587Q96SQ5 575 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 MRPL37Q9BZE1 423 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 TPT1P8Q9HAU6 139 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 CACYBPQ9HB71 228 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 SSU72Q9NP77 194 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 B3GNT2Q9NY97 397 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 ZNF232Q9UNY5 417 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 GRIP1Q9Y3R0 1128 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 CMAHPQ9Y471 501 aa8.1□□□□□ -1.11
SMARCE1-210ENST00000481231 IGKV1D-42A0A075B6H8 117 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 A0A0G2JPF8 293 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 A0A1B0GWA3 101 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 ZNF99A8MXY4 864 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 HNRNPCL2B2RXH8 293 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 HNRNPCL3B7ZW38 293 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 AIM2O14862 343 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 HDAC3O15379 428 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 SYNGR3O43761 229 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 HNRNPCL1O60812 293 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 SLC22A3O75751 556 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 HPRP00739 348 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 IL6P05231 212 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 MSMBP08118 114 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 NUDT7P0C024 238 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 ZCCHC18P0CG32 403 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 HNRNPCL4P0DMR1 293 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 IDO1P14902 403 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 ADRA2CP18825 462 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 GRPRP30550 384 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 POU3F1Q03052 451 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 SRSF4Q08170 494 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 PDCD4Q53EL6 469 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 ZNF311Q5JNZ3 666 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 ELFN2Q5R3F8 820 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 PHYHD1Q5SRE7 291 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 CARD17Q5XLA6 110 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 H1FNTQ75WM6 255 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 COMTD1Q86VU5 262 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 CARM1Q86X55 608 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 CCDC36Q8IYA8 594 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 C20orf196Q8IYI0 205 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 BPIFB2Q8N4F0 458 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 MAL2Q969L2 176 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 SLC35B4Q969S0 331 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 RSPO3Q9BXY4 272 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 ARMC7Q9H6L4 198 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 BCL2L10Q9HD36 194 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 DDX28Q9NUL7 540 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 KLHL14Q9P2G3 628 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 REV1Q9UBZ9 1251 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 IFT52Q9Y366 437 aa8.09□□□□□ -1.11
SMARCE1-210ENST00000481231 TRAV36DV7A0A075B6V5 113 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 LOC102725191A0A1B0GVB3 256 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 TMEM247A6NEH6 219 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 M0R233 179 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 M0R3G1 203 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 AKAP8O43823 692 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 OR2T1O43869 369 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 ANP32DO95626 131 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 PNPP00491 289 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 HPXP02790 462 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 SAGP10523 405 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 CD79AP11912 226 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 TCN1P20061 433 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 HTR2AP28223 471 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 ALDH3B1P43353 468 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 EVX1P49640 407 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 OCLNQ16625 522 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 C6orf10Q5SRN2 563 aa8.08□□□□□ -1.12
SMARCE1-210ENST00000481231 FAM69AQ5T7M9 428 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms