RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 LMO4P61968 165 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 MYBPC1Q00872 1141 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 CHI3L2Q15782 390 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 FXNQ16595 210 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 MSMPQ1L6U9 139 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 TRMT5Q32P41 509 aaKnown RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 FAM69AQ5T7M9 428 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ATG16L1Q676U5 607 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 FAHD2BQ6P2I3 314 aaPredicted RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 C6orf89Q6UWU4 347 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 H1FNTQ75WM6 255 aaPredicted RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 SERPINA11Q86U17 422 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 CARM1Q86X55 608 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 SNX32Q86XE0 403 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 C20orf196Q8IYI0 205 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 GLB1L3Q8NCI6 653 aaPredicted RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 ADPRHL1Q8NDY3 354 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 SLC38A4Q969I6 547 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 FAHD2AQ96GK7 314 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 PKNOX2Q96KN3 472 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZNF75AQ96N20 296 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 SORT1Q99523 831 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZBTB18Q99592 522 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZNF416Q9BWM5 594 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 C20orf27Q9GZN8 174 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZNF385DQ9H6B1 395 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 NARFLQ9H6Q4 476 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZNF275Q9NSD4 429 aaPredicted RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 AIG1Q9NVV5 245 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 TREM2Q9NZC2 230 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 FBXL3Q9UKT7 428 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 ZNF346Q9UL40 294 aaKnown RBP8.29□□□□□ -1.08
CCM2-210ENST00000478169 MEGF8Q7Z7M0 2845 aa8.29□□□□□ -1.08
CCM2-210ENST00000478169 WDR91A4D1P6 747 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 M0R082 166 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 M0R3G1 203 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 WNT9BO14905 357 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 PPIHO43447 177 aaKnown RBP8.28□□□□□ -1.08
CCM2-210ENST00000478169 TRAF3IP2O43734 574 aaPredicted RBP8.28□□□□□ -1.08
CCM2-210ENST00000478169 SEC14L2O76054 403 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 IL6P05231 212 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 BCHEP06276 602 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 ZCCHC18P0CG32 403 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 ETFAP13804 333 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 TCN1P20061 433 aaPredicted RBP8.28□□□□□ -1.08
CCM2-210ENST00000478169 EPHA1P21709 976 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 GRPRP30550 384 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 ALDH3B1P43353 468 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 SEC24CP53992 1094 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 GALK2Q01415 458 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 MFSD13AQ14CX5 517 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 MMEL1Q495T6 779 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 PDCD4Q53EL6 469 aaKnown RBP8.28□□□□□ -1.08
CCM2-210ENST00000478169 ZNF311Q5JNZ3 666 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 PHYHD1Q5SRE7 291 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 GKAP1Q5VSY0 366 aaPredicted RBP8.28□□□□□ -1.08
CCM2-210ENST00000478169 ZNF813Q6ZN06 617 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 UEVLDQ8IX04 471 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 ZNF417Q8TAU3 575 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 MGARPQ8TDB4 240 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 YIPF5Q969M3 257 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 TAAR8Q969N4 342 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 TMEM19Q96HH6 336 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 ZNF587Q96SQ5 575 aaPredicted RBP8.28□□□□□ -1.08
CCM2-210ENST00000478169 SYT3Q9BQG1 590 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 TPT1P8Q9HAU6 139 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 LPAR2Q9HBW0 351 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 B3GAT2Q9NPZ5 323 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 SLC52A3Q9NQ40 469 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 RPS6KB2Q9UBS0 482 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 SEC14L4Q9UDX3 406 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 POFUT2Q9Y2G5 429 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 GPR45Q9Y5Y3 372 aa8.28□□□□□ -1.08
CCM2-210ENST00000478169 TRAV36DV7A0A075B6V5 113 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 MS4A18H0YCH9 400 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 RP2O75695 350 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 RGS9O75916 674 aaPredicted RBP8.27□□□□□ -1.09
CCM2-210ENST00000478169 RAB36O95755 333 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 LSP1P33241 339 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 PTDSS1P48651 473 aaKnown RBP8.27□□□□□ -1.09
CCM2-210ENST00000478169 RAB1AP62820 205 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 HOXC5Q00444 222 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 PIGFQ07326 219 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 STX3Q13277 289 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 MS4A18Q3C1V0 323 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 RPS26P11Q5JNZ5 115 aaPredicted RBP8.27□□□□□ -1.09
CCM2-210ENST00000478169 ACSM5Q6NUN0 579 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 THSD4Q6ZMP0 1018 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 C1orf229Q6ZS94 237 aaPredicted RBP8.27□□□□□ -1.09
CCM2-210ENST00000478169 LRP11Q86VZ4 500 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 LSMEM1Q8N8F7 131 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 OR6S1Q8NH40 331 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 DNAJA4Q8WW22 397 aaPredicted RBP8.27□□□□□ -1.09
CCM2-210ENST00000478169 SLC41A3Q96GZ6 507 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 TMEM109Q9BVC6 243 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 SUCNR1Q9BXA5 334 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 BCL2L10Q9HD36 194 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 SSU72Q9NP77 194 aaKnown RBP8.27□□□□□ -1.09
CCM2-210ENST00000478169 G6PC2Q9NQR9 355 aa8.27□□□□□ -1.09
CCM2-210ENST00000478169 SLC6A13Q9NSD5 602 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms