RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 DND1Q8IYX4 353 aaKnown RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 RNF113BQ8IZP6 322 aaKnown RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 GTPBP8Q8N3Z3 284 aaPredicted RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 ACTRT3Q9BYD9 372 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 TMEM231Q9H6L2 316 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 ATG4BQ9Y4P1 393 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 ETV7Q9Y603 341 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 A0A1W2PR48 441 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 IDSB3KWA1 339 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 ACTL6AO96019 429 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 OR4E1P0C645 316 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 NFYBP25208 207 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 NDUFS1P28331 727 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 SOX2P48431 317 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 PSMD4P55036 377 aaKnown RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 SRSF3P84103 164 aaKnown RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 ZNF234Q14588 700 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 C11orf87Q6NUJ2 197 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 C3orf33Q6P1S2 294 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 UNQ6126/PRO20091Q6UXV3 157 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 ZSCAN1Q8NBB4 408 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 SLC16A11Q8NCK7 471 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 OR4K13Q8NH42 304 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 CDS1Q92903 461 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 ARL11Q969Q4 196 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 TSPAN10Q9H1Z9 355 aaPredicted RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 MTHFD2LQ9H903 347 aaPredicted RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 USP36Q9P275 1121 aaKnown RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 NCDNQ9UBB6 729 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 CARHSP1Q9Y2V2 147 aaKnown RBP12.3□□□□□ -0.44
DFFB-209ENST00000477548 MED31Q9Y3C7 131 aa12.3□□□□□ -0.44
DFFB-209ENST00000477548 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 BRINP1O60477 761 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 LILRB5O75023 590 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 PMS2P2O95744 297 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 CD3DP04234 171 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 F3P13726 295 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 EDN3P14138 238 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 TMEM11P17152 192 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 PLA2G7Q13093 441 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 STAC2Q6ZMT1 411 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 SKA3Q8IX90 412 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 MRPL48Q96GC5 212 aaKnown RBP12.29□□□□□ -0.44
DFFB-209ENST00000477548 SEC22AQ96IW7 307 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 KLHL31Q9H511 634 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 C2orf42Q9NWW7 574 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 DHCR7Q9UBM7 475 aaKnown RBP12.29□□□□□ -0.44
DFFB-209ENST00000477548 UPB1Q9UBR1 384 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 MIOXQ9UGB7 285 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 CDV3Q9UKY7 258 aaKnown RBP12.29□□□□□ -0.44
DFFB-209ENST00000477548 TRBV23-1A0A0A0MS06 115 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 CENPVL1A0A0U1RR11 272 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 XRCC3O43542 346 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 RPN2P04844 631 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 AMZ1Q400G9 498 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 EIPR1Q53HC9 387 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 ACOT7LQ6ZUV0 252 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 DCUN1D3Q8IWE4 304 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 ARSGQ96EG1 525 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 POLE3Q9NRF9 147 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 COL4A3Q01955 1670 aa12.29□□□□□ -0.44
DFFB-209ENST00000477548 TMEM82A0PJX8 343 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 K7ESM1 405 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 ERI3O43414 337 aaKnown RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 ZFPL1O95159 310 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 AIFM1O95831 613 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 CD1AP06126 327 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 LAMP2P13473 410 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 PEA15Q15121 130 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 PLEKHN1Q494U1 663 aaPredicted RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 ARHGAP11AQ6P4F7 1023 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 ENPP7Q6UWV6 458 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 POMGNT2Q8NAT1 580 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 TFGQ92734 400 aaPredicted RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 ZNF285Q96NJ3 590 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 TNFRSF13CQ96RJ3 184 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 RNF208Q9H0X6 261 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 DPEP2Q9H4A9 486 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 MRPS30Q9NP92 439 aaKnown RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 CXXC1Q9P0U4 656 aaPredicted RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 ZNF705EA8MWA4 302 aaPredicted RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 CCSO14618 274 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 TMEM127O75204 238 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 CXCL14O95715 111 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 CD8AP01732 235 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 ANXA2P07355 339 aaKnown RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 S100PP25815 95 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 GRPRP30550 384 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 TPGS2Q68CL5 300 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 ASTLQ6HA08 431 aaPredicted RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 TMPRSS11FQ6ZWK6 438 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 DPPA4Q7L190 304 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 CPNE2Q96FN4 548 aaPredicted RBP12.28□□□□□ -0.44
DFFB-209ENST00000477548 IGSF21Q96ID5 467 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 SERINC2Q96SA4 455 aa12.28□□□□□ -0.44
DFFB-209ENST00000477548 TRPV4Q9HBA0 871 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms