RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ENKD1Q9H0I2 346 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 METTL8Q9H825 291 aaKnown RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF701Q9NV72 531 aaPredicted RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 SIGLEC7Q9Y286 467 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ANKRD36A6QL64 1941 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 EIF4EP06730 217 aaKnown RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 SRMP19623 302 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 CD27P26842 260 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 KIR2DL3P43628 341 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 VEGFCP49767 419 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 HSD17B7P56937 341 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 CBFBQ13951 182 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 PAPD4Q6PIY7 484 aaKnown RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 DPY19L2P2Q6ZN68 376 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 KANSL1Q7Z3B3 1105 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 EID2Q8N6I1 236 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 GPR119Q8TDV5 335 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 UCN2Q96RP3 112 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 FGF20Q9NP95 211 aaPredicted RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 NRIP3Q9NQ35 241 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ANKRD10Q9NXR5 420 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 TMED7-TICAM2A0A0A6YYA0 188 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 IGHV5-51A0A0C4DH38 117 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 NPIPA2E9PIF3 369 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 NPIPA3F8WFD2 350 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ICOSLGO75144 302 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 MPIG6BO95866 241 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 TCRBP04435 133 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 SLC6A8P48029 635 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 SNU13P55769 128 aaKnown RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 RNASE10Q5GAN6 216 aaKnown RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 MRM1Q6IN84 353 aaKnown RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 SLC25A24Q6NUK1 477 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 CORO6Q6QEF8 472 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ELMOD2Q8IZ81 293 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ACBD4Q8NC06 268 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 OR5L2Q8NGL0 311 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF417Q8TAU3 575 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 C15orf40Q8WUR7 153 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 RANBP3Q9H6Z4 567 aaPredicted RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 NOX3Q9HBY0 568 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 TMED7Q9Y3B3 224 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 LRRC37A2A6NM11 1700 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 OR2AT4A6NND4 320 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 EEF1E1-BLOC1S5C9J1V9 151 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 TP53I11O14683 189 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 TBX19O60806 448 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 SCRG1O75711 98 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 OR7A10O76100 309 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 GPANK1O95872 356 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 RRAS2P62070 204 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 COMTD1Q86VU5 262 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 BRIX1Q8TDN6 353 aaKnown RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 PGAM5Q96HS1 289 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF471Q9BX82 626 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 POTEKPQ9BYX7 375 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 RABL2AQ9UBK7 228 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 SUSD2Q9UGT4 822 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 EMC9Q9Y3B6 208 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 PTRH2Q9Y3E5 179 aaKnown RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 SPEF1Q9Y4P9 236 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 A0A1B0GTH9 108 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 ZSCAN5BA6NJL1 495 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF208O43345 1280 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 HTR2AP28223 471 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 CAPZBP47756 277 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 LSSP48449 732 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 POU3F4P49335 361 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 RPL18Q07020 188 aaKnown RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 FZD2Q14332 565 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 POU4F3Q15319 338 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 TMEM176BQ3YBM2 270 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 ABHD12BQ7Z5M8 362 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 OR5D18Q8NGL1 313 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 SLC2A12Q8TD20 617 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 ADAMTS14Q8WXS8 1223 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 SLC46A1Q96NT5 459 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 OR2S2Q9NQN1 319 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 ABRACLQ9P1F3 81 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 POMT2Q9UKY4 750 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 TRABD2BA6NFA1 517 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 NSA2O95478 260 aaKnown RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 RAB3DO95716 219 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 S100A10P60903 97 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 DEFA5Q01523 94 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 C14orf28Q4W4Y0 310 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 PTCRAQ6ISU1 281 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 UEVLDQ8IX04 471 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 BOLLQ8N9W6 283 aaKnown RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 ACTR6Q9GZN1 396 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 MAN2C1Q9NTJ4 1040 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 CGGBP1Q9UFW8 167 aaPredicted RBP10.09□□□□□ -0.79
COL27A1-204ENST00000477421 MAB21L2Q9Y586 359 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 DOCK8Q8NF50 2099 aa10.09□□□□□ -0.79
COL27A1-204ENST00000477421 A0A087WV62 115 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 EPOPA6NHQ4 379 aa10.08□□□□□ -0.8
COL27A1-204ENST00000477421 SULT2B1O00204 365 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms