RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SLC25A18Q9H1K4 315 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 EXO5Q9H790 373 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 TMEM185BQ9H7F4 350 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 GNG8Q9UK08 70 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 HEATR5BQ9P2D3 2071 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 TBC1D3KA0A087X1G2 549 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 A0A1B0GTI1 187 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 TBC1D3FA6NER0 549 aaPredicted RBP13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 FGF16O43320 207 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 SGCEO43556 437 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 OR1F1O43749 312 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 ITGB2P05107 769 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 ACAA1P09110 424 aaPredicted RBP13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 BDKRB2P30411 391 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 CSF2RBP32927 897 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 AGERQ15109 404 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 VWA2Q5GFL6 755 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 TBC1D3GQ6DHY5 549 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 C11orf87Q6NUJ2 197 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 ZNF813Q6ZN06 617 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 ACOT7LQ6ZUV0 252 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 ZNF765Q7L2R6 523 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 DND1Q8IYX4 353 aaKnown RBP13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 OR5M8Q8NGP6 311 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 PFN4Q8NHR9 129 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 DTD2Q96FN9 168 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 PTDSS2Q9BVG9 487 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 ZNF471Q9BX82 626 aaPredicted RBP13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 SEC11CQ9BY50 192 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 OR52A5Q9H2C5 316 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 RNF122Q9H9V4 155 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 MKL2Q9ULH7 1088 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 GPR34Q9UPC5 381 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 WDR45Q9Y484 360 aa13.96□□□□□ -0.18
CLSTN1-205ENST00000477264 EDDM13A0A1B0GTR0 161 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 EIF3GO75821 320 aaKnown RBP eCLIP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 KAT7O95251 611 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 LYPD3O95274 346 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ZIC2O95409 532 aaPredicted RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 CLUP10909 449 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 SPI1P17947 270 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 MC3RP41968 323 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 AMZ1Q400G9 498 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 LY6G6FQ5SQ64 297 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 MRM1Q6IN84 353 aaKnown RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 SLC48A1Q6P1K1 146 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ENPP7Q6UWV6 458 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ZNF793Q6ZN11 406 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ZNF227Q86WZ6 799 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 CCDC116Q8IYX3 515 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 OR1S2Q8NGQ3 325 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 RBM18Q96H35 190 aaKnown RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 VRK1Q99986 396 aaPredicted RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 OR2AG1Q9H205 316 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 TCF7L1Q9HCS4 588 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 NCDNQ9UBB6 729 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 SERTAD3Q9UJW9 196 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 FBXL21Q9UKT6 434 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 FEZF1A0PJY2 475 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 OR6C68A6NDL8 312 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 LRRC72A6NJI9 287 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 PPP1R3DO95685 299 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 APODP05090 189 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 F3P13726 295 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ADCYAP1P18509 176 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ACTBP60709 375 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ACTG1P63261 375 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 BLOC1S1P78537 153 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ZNF234Q14588 700 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 SMAD2Q15796 467 aaKnown RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 HNRNPA1L2Q32P51 320 aaKnown RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ARHGAP11BQ3KRB8 267 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 SLC35D3Q5M8T2 416 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 SLC6A19Q695T7 634 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 H3F3CQ6NXT2 135 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 OR2L13Q8N349 312 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 RFLNBQ8N5W9 214 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 AMER3Q8N944 861 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 PDCD1LG2Q9BQ51 273 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 SLC25A21Q9BQT8 299 aaPredicted RBP13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 POTEKPQ9BYX7 375 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 C20orf141Q9NUB4 165 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 ASF1BQ9NVP2 202 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 PLAGL1Q9UM63 463 aa13.95□□□□□ -0.18
CLSTN1-205ENST00000477264 GXYLT2A0PJZ3 443 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 PRNPP04156 253 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 CFPP27918 469 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 ITPKBP27987 946 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 DLSTP36957 453 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 ARHGDIBP52566 201 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 CXADRP78310 365 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 LTBQ06643 244 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 OR1Q1Q15612 314 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 IL34Q6ZMJ4 242 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 WDR88Q6ZMY6 472 aa13.94□□□□□ -0.18
CLSTN1-205ENST00000477264 NDUFAF7Q7L592 441 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms