RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 RETREG3Q86VR2 466 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 LSRQ86X29 649 aaPredicted RBP12.9□□□□□ -0.34
TRIM11-203ENST00000475775 CADM2Q8N3J6 435 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 TMEM99Q8N816 258 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 C10orf105Q8TEF2 133 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 ASB9Q96DX5 294 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 KCNK17Q96T54 332 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 BCL2L10Q9HD36 194 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 BATF3Q9NR55 127 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 ADPRHL2Q9NX46 363 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 NKX1-2Q9UD57 310 aaPredicted RBP12.9□□□□□ -0.34
TRIM11-203ENST00000475775 LEF1Q9UJU2 399 aaPredicted RBP12.9□□□□□ -0.34
TRIM11-203ENST00000475775 ZNF232Q9UNY5 417 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 CHST2Q9Y4C5 530 aa12.9□□□□□ -0.34
TRIM11-203ENST00000475775 ATP6V1G2-DDX39BF2Z307 99 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 CRYAAP02489 173 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 ARAFP10398 606 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 GPX2P18283 190 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 CDH2P19022 906 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-203ENST00000475775 USF1P22415 310 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-203ENST00000475775 PDLIM4P50479 330 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 BNIP2Q12982 314 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 GCNT6Q5T4J0 391 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 CYB5R2Q6BCY4 276 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 REP15Q6BDI9 236 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 DHDDSQ86SQ9 333 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 CLIP4Q8N3C7 705 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 DPP10Q8N608 796 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 BBS10Q8TAM1 723 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
TRIM11-203ENST00000475775 PIMREGQ9BSJ6 248 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 KATNB1Q9BVA0 655 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-203ENST00000475775 MOKQ9UQ07 419 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 RASD1Q9Y272 281 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 IFT52Q9Y366 437 aa12.89□□□□□ -0.35
TRIM11-203ENST00000475775 TGP01266 2768 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 FRS3O43559 492 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 PDE5AO76074 875 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 AHSA1O95433 338 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 GKN3PP0CG01 181 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 HOXB6P17509 224 aaKnown RBP12.88□□□□□ -0.35
TRIM11-203ENST00000475775 ACAA2P42765 397 aaKnown RBP12.88□□□□□ -0.35
TRIM11-203ENST00000475775 GZMKP49863 264 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 SH3BGRP55822 239 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-203ENST00000475775 TRIM25Q14258 630 aaKnown RBP12.88□□□□□ -0.35
TRIM11-203ENST00000475775 C3orf36Q3SXR2 165 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 HIKESHIQ53FT3 197 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 RUNDC3AQ59EK9 446 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 C1orf140Q5VVS0 124 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-203ENST00000475775 OR1K1Q8NGR3 316 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 NFKBIDQ8NI38 313 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 STK35Q8TDR2 534 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 SLC26A7Q8TE54 656 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 DNAJC9Q8WXX5 260 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 HTRA1Q92743 480 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 SLC35B4Q969S0 331 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 CLPTM1LQ96KA5 538 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 ALKBH3Q96Q83 286 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-203ENST00000475775 SLC38A2Q96QD8 506 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 SPATA9Q9BWV2 254 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 RSPO3Q9BXY4 272 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-203ENST00000475775 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 CORO2BQ9UQ03 480 aa12.88□□□□□ -0.35
TRIM11-203ENST00000475775 ARPC4-TTLL3A0A0A6YYG9 625 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 CASQ2O14958 399 aaPredicted RBP12.87□□□□□ -0.35
TRIM11-203ENST00000475775 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
TRIM11-203ENST00000475775 HSD17B1P14061 328 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 ETS2P15036 469 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
TRIM11-203ENST00000475775 LSM11P83369 360 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRIM11-203ENST00000475775 CDK6Q00534 326 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 CCNIQ14094 377 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 TAF11Q15544 211 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 ADRM1Q16186 407 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 TBRG1Q3YBR2 411 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 NIPAL3Q6P499 406 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 C5orf46Q6UWT4 87 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 SLC46A3Q7Z3Q1 461 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 ZIC4Q8N9L1 334 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 ZNF540Q8NDQ6 660 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 MAGEE2Q8TD90 523 aaPredicted RBP12.87□□□□□ -0.35
TRIM11-203ENST00000475775 DUS3LQ96G46 650 aaKnown RBP12.87□□□□□ -0.35
TRIM11-203ENST00000475775 CGREF1Q99674 301 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 LINC00470Q9BZP3 86 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 TMEM38AQ9H6F2 299 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 CA10Q9NS85 328 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 ABCD2Q9UBJ2 740 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 LRCH1Q9Y2L9 728 aa12.87□□□□□ -0.35
TRIM11-203ENST00000475775 TENM1Q9UKZ4 2725 aa12.86□□□□□ -0.35
TRIM11-203ENST00000475775 IGHV1-18A0A0C4DH31 117 aa12.86□□□□□ -0.35
TRIM11-203ENST00000475775 VSTM5A8MXK1 200 aa12.86□□□□□ -0.35
TRIM11-203ENST00000475775 EVPLLA8MZ36 301 aa12.86□□□□□ -0.35
TRIM11-203ENST00000475775 B9A039 149 aa12.86□□□□□ -0.35
TRIM11-203ENST00000475775 C5orf58C9J3I9 102 aa12.86□□□□□ -0.35
TRIM11-203ENST00000475775 FBP2O00757 339 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms