RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 VIPAS39Q9H9C1 493 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 MYOZ1Q9NP98 299 aaPredicted RBP17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 MRPL39Q9NYK5 338 aaKnown RBP17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 USP22Q9UPT9 525 aa17.7■□□□□ 0.42
PDLIM4-206ENST00000474421 NDUFS8O00217 210 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 GPRIN2O60269 458 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 MT-ATP6P00846 226 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 IFNA2P01563 188 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 BGLAPP02818 100 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 VIMP08670 466 aaKnown RBP17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 OR4A8P0C604 315 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 PDLIM4P50479 330 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 CDH12P55289 794 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 PUDPQ08623 228 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 C6orf52Q5T4I8 152 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 PTOV1Q86YD1 416 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 C20orf196Q8IYI0 205 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 C10orf53Q8N6V4 93 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 SMYD1Q8NB12 490 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 MCHR1Q99705 422 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 ZNF442Q9H7R0 627 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 ARGLU1Q9NWB6 273 aaPredicted RBP17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 RTTNQ86VV8 2226 aa17.69■□□□□ 0.42
PDLIM4-206ENST00000474421 M0R3G1 203 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 TPST2O60704 377 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 USF1P22415 310 aaPredicted RBP17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 POU3F1Q03052 451 aaPredicted RBP17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 ADIPOQQ15848 244 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 CHRFAM7AQ494W8 412 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 METTL21CQ5VZV1 264 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 VHLLQ6RSH7 139 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 PXKQ7Z7A4 578 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 PATL1Q86TB9 770 aaKnown RBP17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 MDFIQ99750 246 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 ARHGDIGQ99819 225 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 PIMREGQ9BSJ6 248 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 PLK3Q9H4B4 646 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 ZNF385DQ9H6B1 395 aa17.68■□□□□ 0.42
PDLIM4-206ENST00000474421 COL6A5A8TX70 2615 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 ZNF726A6NNF4 738 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 M0QX08 132 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 CHP2O43745 196 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 HPRP00739 348 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 CALCRP30988 508 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 CAPZA2P47755 286 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 PPOXP50336 477 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 IDH3GP51553 393 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 MTPNP58546 118 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 NFYCQ13952 458 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 INTS11Q5TA45 600 aaKnown RBP17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 CARD17Q5XLA6 110 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 CYB5R2Q6BCY4 276 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 PODNL1Q6PEZ8 512 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 NANOS1Q8WY41 292 aaKnown RBP17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 ZNF837Q96EG3 531 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 THOC1Q96FV9 657 aaKnown RBP17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 MOGAT1Q96PD6 335 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 SORCS2Q96PQ0 1159 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 VRK1Q99986 396 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 NPHS2Q9NP85 383 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 MRGBPQ9NV56 204 aa17.67■□□□□ 0.42
PDLIM4-206ENST00000474421 LOC390937A0A1W2PQ73 354 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 SLC35F4A4IF30 521 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 M0R3H8 397 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 PLPP3O14495 311 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 LY6HO94772 140 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 OR6A2O95222 327 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 ERCC1P07992 297 aaPredicted RBP17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 HLA-DOBP13765 273 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 AHCYP23526 432 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 LSM11P83369 360 aaKnown RBP eCLIP17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 NPRL3Q12980 569 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 DUSP7Q16829 419 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 LINC00114Q6XXX2 140 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 MDP1Q86V88 176 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 RETREG3Q86VR2 466 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 OR6N1Q8NGY5 312 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 OR5J2Q8NH18 312 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 RASSF5Q8WWW0 418 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 WFDC6Q9BQY6 131 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 EMC6Q9BV81 110 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 RAB1BQ9H0U4 201 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 KAT8Q9H7Z6 458 aaKnown RBP17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 SEC61A2Q9H9S3 476 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 TMEM160Q9NX00 188 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 CDC42EP3Q9UKI2 254 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 POFUT2Q9Y2G5 429 aa17.66■□□□□ 0.42
PDLIM4-206ENST00000474421 IGHV2OR16-5A0A0B4J2B6 119 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 A0A0G2JND7 137 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 EDF1O60869 148 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 CELA3BP08861 270 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 NPR2P20594 1047 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 PCGF2P35227 344 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 GZMKP49863 264 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 HGFACQ04756 655 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 ZNF627Q7L945 461 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 CXXC5Q7LFL8 322 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 ZNF540Q8NDQ6 660 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 OR6T1Q8NGN1 323 aa17.65■□□□□ 0.42
PDLIM4-206ENST00000474421 SLC26A7Q8TE54 656 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms