RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 NUP37Q8NFH4 326 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 LRR1Q96L50 414 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 MAGEB18Q96M61 343 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 ANKRD27Q96NW4 1050 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 TMEM43Q9BTV4 400 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 PLK3Q9H4B4 646 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 SEC61A2Q9H9S3 476 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 MRPL39Q9NYK5 338 aaKnown RBP13.28□□□□□ -0.28
VTI1A-203ENST00000472892 ANGPT4Q9Y264 503 aa13.28□□□□□ -0.28
VTI1A-203ENST00000472892 ZNF99A8MXY4 864 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-203ENST00000472892 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 M0QX08 132 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 C8BP07358 591 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 CELA3BP08861 270 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 OR4A8P0C604 315 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 NQO1P15559 274 aaKnown RBP13.27□□□□□ -0.29
VTI1A-203ENST00000472892 ARR3P36575 388 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 IL1RL1Q01638 556 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 DUSP7Q16829 419 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 C6orf52Q5T4I8 152 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF613Q6PF04 617 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 DHDDSQ86SQ9 333 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 RETREG3Q86VR2 466 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 RANBP3LQ86VV4 465 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-203ENST00000472892 SMYD1Q8NB12 490 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 RNF217Q8TC41 542 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 TSPEARQ8WU66 669 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 TXNDC15Q96J42 360 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 MOGAT1Q96PD6 335 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 SORCS2Q96PQ0 1159 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 ARHGDIGQ99819 225 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 ASPNQ9BXN1 380 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 NOX1Q9Y5S8 564 aa13.27□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF503-AS2A6NEH8 195 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 M0R3G1 203 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 NDUFS8O00217 210 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 PLPP3O14495 311 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 USF1P22415 310 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-203ENST00000472892 PDLIM4P50479 330 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 PMS2P3Q13401 168 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 ATRQ13535 2644 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 SELPLGQ14242 412 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 ARFGEF3Q5TH69 2177 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF627Q7L945 461 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 CXXC5Q7LFL8 322 aaKnown RBP13.26□□□□□ -0.29
VTI1A-203ENST00000472892 PXKQ7Z7A4 578 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 MYPOPQ86VE0 399 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-203ENST00000472892 IL17RDQ8NFM7 739 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 GPR32P1Q8NGA4 272 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 THOC1Q96FV9 657 aaKnown RBP13.26□□□□□ -0.29
VTI1A-203ENST00000472892 CGREF1Q99674 301 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 MCHR1Q99705 422 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 EMC6Q9BV81 110 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF442Q9H7R0 627 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 KAT8Q9H7Z6 458 aaKnown RBP13.26□□□□□ -0.29
VTI1A-203ENST00000472892 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 B3GNT2Q9NY97 397 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 FBXO9Q9UK97 447 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-203ENST00000472892 TRIM33Q9UPN9 1127 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 FKBP7Q9Y680 259 aa13.26□□□□□ -0.29
VTI1A-203ENST00000472892 CUBNO60494 3623 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 SLC35F4A4IF30 521 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 VSTM5A8MXK1 200 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 LRRN3E7EW58 273 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 ANGPT2O15123 496 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 MT-ATP6P00846 226 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 IDH3GP51553 393 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-203ENST00000472892 MTPNP58546 118 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 POU3F1Q03052 451 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-203ENST00000472892 PUDPQ08623 228 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 NPTX1Q15818 432 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 CYP51A1Q16850 503 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 CHRFAM7AQ494W8 412 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 METTL21CQ5VZV1 264 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 CARD17Q5XLA6 110 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 CYB5R2Q6BCY4 276 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 PODNL1Q6PEZ8 512 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 VHLLQ6RSH7 139 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 HDXQ7Z353 690 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 SLC46A3Q7Z3Q1 461 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 MDP1Q86V88 176 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 WDFY1Q8IWB7 410 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 OR6T1Q8NGN1 323 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 SPATA3Q8NHX4 192 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 DOK1Q99704 481 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 VRK1Q99986 396 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-203ENST00000472892 MYOZ1Q9NP98 299 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-203ENST00000472892 TMEM160Q9NX00 188 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 MED29Q9NX70 200 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 USP22Q9UPT9 525 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 COL6A5A8TX70 2615 aa13.25□□□□□ -0.29
VTI1A-203ENST00000472892 IGHV2OR16-5A0A0B4J2B6 119 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 LOC390937A0A1W2PQ73 354 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 ZNF726A6NNF4 738 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 M0R3H8 397 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 CHP2O43745 196 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 EDF1O60869 148 aaKnown RBP13.24□□□□□ -0.29
VTI1A-203ENST00000472892 LYPD3O95274 346 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 IFNA2P01563 188 aa13.24□□□□□ -0.29
VTI1A-203ENST00000472892 THY1P04216 161 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms