RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 SCAMP1O15126 338 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 GPRIN2O60269 458 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 LCMT2O60294 686 aaKnown RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 ERAL1O75616 437 aaKnown RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 C1QL1O75973 258 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 ZIC2O95409 532 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 RAB40ALP0C0E4 278 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 HOXB1P14653 301 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 TSFMP43897 325 aaKnown RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 GPR1P46091 355 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 GDI2P50395 445 aaKnown RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 DUSP3P51452 185 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF136P52737 540 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 RPS11P62280 158 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 RPS21P63220 83 aaKnown RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 TLE3Q04726 772 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 EIF2B5Q13144 721 aaKnown RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 MPPED2Q15777 294 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 OR5M10Q6IEU7 315 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 SLC48A1Q6P1K1 146 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 GSG1LQ6UXU4 331 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 RPTNQ6XPR3 784 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 FRRS1Q6ZNA5 592 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 DNM1P46Q6ZS02 220 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 RANBP3LQ86VV4 465 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 CDH26Q8IXH8 852 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 STPG2Q8N412 459 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 OR1S1Q8NH92 325 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 COQ8AQ8NI60 647 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 RAB40AQ8WXH6 277 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 ORAI1Q96D31 301 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 GIMAP5Q96F15 307 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 BMFQ96LC9 184 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 LRFN5Q96NI6 719 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 DPH1Q9BZG8 443 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 MS4A7Q9GZW8 240 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 AICDAQ9GZX7 198 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 SLC25A32Q9H2D1 315 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 CACYBPQ9HB71 228 aaKnown RBP8.77□□□□□ -1.01
HDAC3-205ENST00000469550 NTMQ9P121 344 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF69Q9UC07 566 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 OPN4Q9UHM6 478 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 CYB5R1Q9UHQ9 305 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 PRELID3BQ9Y3B1 194 aa8.77□□□□□ -1.01
HDAC3-205ENST00000469550 TDRD6O60522 2096 aaKnown RBP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 IFITM5A6NNB3 132 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 FCMRO60667 390 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 FMO6PO60774 539 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 PCDH8O95206 1070 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 HPP00738 406 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 OR2T7P0C7T2 308 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 F3P13726 295 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ADRB3P13945 408 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 NME1P15531 152 aaKnown RBP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 MAKP20794 623 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 HIST1H1TP22492 207 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 DPP4P27487 766 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 PTH2RP49190 550 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 PDX1P52945 283 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 GMFBP60983 142 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 HNRNPKP61978 463 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 EEF1A1P68104 462 aaKnown RBP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SIRPAP78324 504 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 DUSP2Q05923 314 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 DUSP8Q13202 625 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 FGL2Q14314 439 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 FZD2Q14332 565 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ZMYND11Q15326 602 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ETFDHQ16134 617 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SFRP5Q5T4F7 317 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ALKAL2Q6UX46 152 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 Q6ZSR6 202 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 PARS2Q7L3T8 475 aaKnown RBP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SPACA3Q8IXA5 215 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 CDK20Q8IZL9 346 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 DNAAF1Q8NEP3 725 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 OR13C5Q8NGS8 318 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 OR6K3Q8NGY3 331 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 OR2T27Q8NH04 317 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ADAMTS15Q8TE58 950 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 TMEM239Q8WW34 195 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 NSMAFQ92636 917 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 RAB7BQ96AH8 199 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SLC25A38Q96DW6 304 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 NUS1Q96E22 293 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 S100A16Q96FQ6 103 aaKnown RBP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SLC35A4Q96G79 324 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ZNF681Q96N22 645 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SLC17A9Q9BYT1 436 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 ENKD1Q9H0I2 346 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 OR51V1Q9H2C8 321 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 PRDM7Q9NQW5 492 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SIGLEC7Q9Y286 467 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 KCNK7Q9Y2U2 307 aa8.76□□□□□ -1.01
HDAC3-205ENST00000469550 AK6Q9Y3D8 172 aaKnown RBP8.76□□□□□ -1.01
HDAC3-205ENST00000469550 SPTY2D1-AS1A0A0U1RR47 76 aa8.75□□□□□ -1.01
HDAC3-205ENST00000469550 UBE2QL1A1L167 161 aa8.75□□□□□ -1.01
HDAC3-205ENST00000469550 K7ESM1 405 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms