RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SLC16A1P53985 500 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 RPS3AP61247 264 aaKnown RBP11.4□□□□□ -0.58
TRAF4-208ENST00000469529 ERVK-25P63136 954 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 ACKR1Q16570 336 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 PLEKHN1Q494U1 663 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-208ENST00000469529 KRTCAP3Q53RY4 240 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 HBMQ6B0K9 141 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 TMEM225Q6GV28 225 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 HDDC2Q7Z4H3 204 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 CPOQ8IVL8 374 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 GID4Q8IVV7 300 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 MEIOBQ8N635 442 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 EXTL1Q92935 676 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 Q96M85 177 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 ZNF582Q96NG8 517 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-208ENST00000469529 TSPAN32Q96QS1 320 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 UCN2Q96RP3 112 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 TSPAN10Q9H1Z9 355 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-208ENST00000469529 TMEM185BQ9H7F4 350 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 RNF122Q9H9V4 155 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 HINT3Q9NQE9 182 aaKnown RBP11.4□□□□□ -0.58
TRAF4-208ENST00000469529 VSX1Q9NZR4 365 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-208ENST00000469529 H2AFY2Q9P0M6 372 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-208ENST00000469529 SEC14L4Q9UDX3 406 aa11.4□□□□□ -0.58
TRAF4-208ENST00000469529 A0A087WXM4 84 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 IRGMA1A4Y4 181 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 EFCAB10A6NFE3 127 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 PRR23D1E9PI22 279 aaPredicted RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SLC2A10O95528 541 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 BCL10O95999 233 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 F13BP05160 661 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 PRR23D2P0DMB1 279 aaPredicted RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SFTPCP11686 197 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 ENPP1P22413 925 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SLC2A5P22732 501 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 AHCYP23526 432 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 ACVR2AP27037 513 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 HTR1FP30939 366 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 CDKN2AP42771 156 aaKnown RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 STARP49675 285 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 HSF1Q00613 529 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SLC17A1Q14916 467 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SMN1Q16637 294 aaKnown RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 KLHL22Q53GT1 634 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SLC35D3Q5M8T2 416 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SLC35F1Q5T1Q4 408 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF324BQ6AW86 544 aaPredicted RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 MEPCEQ7L2J0 689 aaKnown RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 CXXC5Q7LFL8 322 aaKnown RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 ADGRE4PQ86SQ3 457 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 EGFL6Q8IUX8 553 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 EXD3Q8N9H8 876 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SLC37A3Q8NCC5 494 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 BPIFB6Q8NFQ5 453 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 TSPAN14Q8NG11 270 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 OR6X1Q8NH79 312 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 OR10D3Q8NH80 312 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 FNDC8Q8TC99 324 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 ZPLD1Q8TCW7 415 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 GGHQ92820 318 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 WDYHV1Q96HA8 205 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 ADAD1Q96M93 576 aaKnown RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 MRPL13Q9BYD1 178 aaKnown RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 PRDM14Q9GZV8 571 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 DEFB127Q9H1M4 99 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 SLC6A15Q9H2J7 730 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 GP6Q9HCN6 339 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 KLHL13Q9P2N7 655 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 WARS2Q9UGM6 360 aaKnown RBP11.39□□□□□ -0.59
TRAF4-208ENST00000469529 MOKQ9UQ07 419 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 ADAM18Q9Y3Q7 739 aa11.39□□□□□ -0.59
TRAF4-208ENST00000469529 FASNP49327 2511 aaKnown RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 IGKV3D-15A0A087WSY6 115 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 PRSS37A4D1T9 235 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 OR6C68A6NDL8 312 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 SLC22A31A6NKX4 558 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF814B7Z6K7 855 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 EIF1AYO14602 144 aaKnown RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 TNFSF11O14788 317 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 TFECO14948 347 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 TRAF3IP2O43734 574 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 CYTIPO60759 359 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 OPN1LWP04000 364 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF43P17038 809 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 TCEA1P23193 301 aaKnown RBP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 FMO3P31513 532 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 BLVRAP53004 296 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRAF4-208ENST00000469529 RAB40BQ12829 278 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 APOFQ13790 326 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 CRMP1Q14194 572 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 GXYLT1Q4G148 440 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 CREB3L2Q70SY1 520 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 SLC35D2Q76EJ3 337 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 PRSS48Q7RTY5 328 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 ZBTB46Q86UZ6 589 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 UEVLDQ8IX04 471 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF540Q8NDQ6 660 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 OR52E2Q8NGJ4 325 aa11.38□□□□□ -0.59
TRAF4-208ENST00000469529 OR4K13Q8NH42 304 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms