RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ARPC5O15511 151 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
USP11-206ENST00000469080 NQO2P16083 231 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 NDUFS1P28331 727 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 GPR143P51810 404 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 OR1D5P58170 312 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 SMIM11AP58511 58 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 GUCA2BQ16661 112 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 CD276Q5ZPR3 534 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 ARL14Q8N4G2 192 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 ZNF383Q8NA42 475 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 ZSCAN1Q8NBB4 408 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 OR5J2Q8NH18 312 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 CPNE4Q96A23 557 aaPredicted RBP11.33□□□□□ -0.6
USP11-206ENST00000469080 DGAT2Q96PD7 388 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 RSPO3Q9BXY4 272 aaPredicted RBP11.33□□□□□ -0.6
USP11-206ENST00000469080 SLC38A1Q9H2H9 487 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 TMEM38AQ9H6F2 299 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 PRDM6Q9NQX0 595 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 PPP4R1LQ9P1A2 415 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 FBXL4Q9UKA2 621 aa11.33□□□□□ -0.6
USP11-206ENST00000469080 CUL9Q8IWT3 2517 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 IQCMA0A1B0GVH7 501 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 GABRB1P18505 474 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 BTG1P62324 171 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PDE7AQ13946 482 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 VWA2Q5GFL6 755 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 HLA-DQA1Q5Y7H0 255 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 IL20RBQ6UXL0 311 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 DGAT2L6Q6ZPD8 337 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 SYT9Q86SS6 491 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ATCAYQ86WG3 371 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 TDHQ8IZJ6 230 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 SVBPQ8N300 66 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ZNF433Q8N7K0 673 aaPredicted RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 MFSD9Q8NBP5 474 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 TMEM185AQ8NFB2 350 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PIGKQ92643 395 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ORAI1Q96D31 301 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PIGQQ9BRB3 760 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 TMEM27Q9HBJ8 222 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 TMEM45AQ9NWC5 275 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PHF11Q9UIL8 331 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 FANCMQ8IYD8 2048 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PLXNB3Q9ULL4 1909 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 H7C1C5 153 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 HOXA6P31267 233 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 CCR6P51684 374 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 LCN6P62502 163 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 TRAM1Q15629 374 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 DCST2Q5T1A1 773 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ETFRF1Q6IPR1 90 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 SDR9C7Q8NEX9 313 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 OR10K1Q8NGX5 313 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 GAL3ST3Q96A11 431 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ZMYND19Q96E35 227 aaPredicted RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 DMRTA2Q96SC8 542 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 CDCA3Q99618 268 aaPredicted RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 RSRP1Q9BUV0 290 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PRO1933Q9H354 126 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PRTFDC1Q9NRG1 225 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 C2orf16Q68DN1 1984 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 OBSL1O75147 1896 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 FAM221BA6H8Z2 402 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 TMEM229AB2RXF0 380 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PRAMEF26H0Y7S4 382 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 FAAHO00519 579 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PPP1R3DO95685 299 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 SPI1P17947 270 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 DRD5P21918 477 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 SELENOPP49908 381 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 LIMK1P53667 647 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 PCBP4P57723 403 aaKnown RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 MELKQ14680 651 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 OAFQ86UD1 273 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 OR1S1Q8NH92 325 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 SIGLEC11Q96RL6 698 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ADOQ96SZ5 270 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ELF4Q99607 663 aaPredicted RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 CCDC86Q9H6F5 360 aaKnown RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 ZNF346Q9UL40 294 aaKnown RBP11.32□□□□□ -0.6
USP11-206ENST00000469080 PLEKHA6Q9Y2H5 1048 aa11.32□□□□□ -0.6
USP11-206ENST00000469080 ANKRD61A6NGH8 418 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 TMEM150CB9EJG8 249 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 ZNF670-ZNF695F2Z2N8 137 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 UBXN7O94888 489 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 CXCL2P19875 107 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 IFNGR2P38484 337 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 MRPL19P49406 292 aaKnown RBP11.31□□□□□ -0.6
USP11-206ENST00000469080 TEX30Q5JUR7 227 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 FAHD1Q6P587 224 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 RPTNQ6XPR3 784 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 SLC29A4Q7RTT9 530 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 MARCH9Q86YJ5 346 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 MISP3Q96FF7 219 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 SRA1Q9HD15 236 aaKnown RBP11.31□□□□□ -0.6
USP11-206ENST00000469080 MED9Q9NWA0 146 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms