RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 A0A1W2PRG6 482 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 OR6C65A6NJZ3 312 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 C11orf98E9PRG8 122 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 G3V2T6 193 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 ZNF432O94892 652 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 IGHMP01871 453 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 ZNF23P17027 643 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 PCYT1AP49585 367 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 FBXL19-AS1Q494R0 122 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 SMARCD3Q6STE5 483 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 TFAP2EQ6VUC0 442 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 ZNF620Q6ZNG0 422 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 SLC35D2Q76EJ3 337 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 AAED1Q7RTV5 226 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 HDDC2Q7Z4H3 204 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 STK32CQ86UX6 486 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 PQLC1Q8N2U9 271 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 ZNF775Q96BV0 537 aaPredicted RBP14.18□□□□□ -0.14
GPC1-207ENST00000466624 SEMA6AQ9H2E6 1030 aa14.18□□□□□ -0.14
GPC1-207ENST00000466624 HCFC1P51610 2035 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 A8MXE2 369 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 F13BP05160 661 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 POU2F1P14859 743 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 ZNF26P17031 533 aaPredicted RBP14.17□□□□□ -0.14
GPC1-207ENST00000466624 NTF4P34130 210 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 ASCL1P50553 236 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 DAP3P51398 398 aaKnown RBP14.17□□□□□ -0.14
GPC1-207ENST00000466624 CLDN17P56750 224 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 FXYD6P3P58550 94 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 FAHD1Q6P587 224 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 CASP12Q6UXS9 341 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 ZNF100Q8IYN0 542 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 HS3ST5Q8IZT8 346 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 OR6X1Q8NH79 312 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 FANK1Q8TC84 345 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 GTPBP3Q969Y2 492 aaKnown RBP14.17□□□□□ -0.14
GPC1-207ENST00000466624 APH1AQ96BI3 265 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 NIPSNAP1Q9BPW8 284 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 OR52D1Q9H346 318 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 TXNIPQ9H3M7 391 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 C12orf49Q9H741 205 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 ZNF556Q9HAH1 456 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 NRIP3Q9NQ35 241 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 IL20Q9NYY1 176 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 STX18Q9P2W9 335 aaKnown RBP14.17□□□□□ -0.14
GPC1-207ENST00000466624 CDH10Q9Y6N8 788 aa14.17□□□□□ -0.14
GPC1-207ENST00000466624 SPTBN1Q01082 2364 aaKnown RBP14.16□□□□□ -0.14
GPC1-207ENST00000466624 CENPBD1B2RD01 187 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 MCIDASD6RGH6 385 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 SMNDC1O75940 238 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPC1-207ENST00000466624 BCL10O95999 233 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 CD14P08571 375 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 APEHP13798 732 aaKnown RBP14.16□□□□□ -0.14
GPC1-207ENST00000466624 IFNGR1P15260 489 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 PRKACGP22612 351 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 SLC6A6P31641 620 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 CTXN1P60606 82 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 CDSNQ15517 529 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 ACKR1Q16570 336 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 RFX4Q33E94 735 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 FAM205BPQ63HN1 556 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 NIPAL3Q6P499 406 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 DPY19L2P2Q6ZN68 376 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 BEND4Q6ZU67 534 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 TMEM123Q8N131 208 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 ATG16L2Q8NAA4 619 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 POMGNT2Q8NAT1 580 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 LRRC46Q96FV0 321 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 TXNDC15Q96J42 360 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 LRR1Q96L50 414 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 OR2M2Q96R28 347 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 LINC00470Q9BZP3 86 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 UCK2Q9BZX2 261 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 OPN3Q9H1Y3 402 aaPredicted RBP14.16□□□□□ -0.14
GPC1-207ENST00000466624 KCNJ16Q9NPI9 418 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 MED29Q9NX70 200 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 KIF17Q9P2E2 1029 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 MALT1Q9UDY8 824 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 FOXD3Q9UJU5 478 aaPredicted RBP14.16□□□□□ -0.14
GPC1-207ENST00000466624 OAZ3Q9UMX2 235 aa14.16□□□□□ -0.14
GPC1-207ENST00000466624 MAGED1Q9Y5V3 778 aaPredicted RBP14.16□□□□□ -0.14
GPC1-207ENST00000466624 ALPK2Q86TB3 2170 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 SLC35F4A4IF30 521 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 ZNF726A6NNF4 738 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 EEF1E1-BLOC1S5C9J1V9 151 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 EEF1E1O43324 174 aaKnown RBP14.15□□□□□ -0.14
GPC1-207ENST00000466624 SLC43A1O75387 559 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 SERPINI2O75830 405 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 TP53P04637 393 aaPredicted RBP14.15□□□□□ -0.14
GPC1-207ENST00000466624 RPL4P36578 427 aaKnown RBP14.15□□□□□ -0.14
GPC1-207ENST00000466624 SELENOPP49908 381 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 BIDP55957 195 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 RPL27P61353 136 aaKnown RBP14.15□□□□□ -0.14
GPC1-207ENST00000466624 ARMC4Q5T2S8 1044 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 FBXW9Q5XUX1 488 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 KLHL17Q6TDP4 642 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 THSD4Q6ZMP0 1018 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 Q6ZT83 130 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 KIF18BQ86Y91 864 aa14.15□□□□□ -0.14
GPC1-207ENST00000466624 PARP8Q8N3A8 854 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms