RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CACYBPQ9HB71 228 aaKnown RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 GPR35Q9HC97 309 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 SEC14L4Q9UDX3 406 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP39-212ENST00000465514 PPIAL4AQ9Y536 164 aa8.39□□□□□ -1.07
USP39-212ENST00000465514 V9GYY5 206 aaPredicted RBP8.39□□□□□ -1.07
USP39-212ENST00000465514 TENM3Q9P273 2699 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 TMEM129A0AVI4 362 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 TMEM247A6NEH6 219 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 VSTM5A8MXK1 200 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 RPL36A-HNRNPH2H7BZ11 118 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 hCG_2039718K7EN88 272 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 SNNO75324 88 aaPredicted RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 SLC43A1O75387 559 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 MSMBP08118 114 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 IDO1P14902 403 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 ZNF43P17038 809 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 NPR2P20594 1047 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 GTF2E2P29084 291 aaKnown RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 C1DQ13901 141 aaKnown RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 ZNF311Q5JNZ3 666 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 CEP85LQ5SZL2 805 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 ZCCHC24Q8N2G6 241 aaKnown RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 GPR137CQ8N3F9 429 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 BPIFB2Q8N4F0 458 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 TAAR8Q969N4 342 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 VPS33AQ96AX1 596 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 ITCHQ96J02 903 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 OXGR1Q96P68 337 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 LRRC37BQ96QE4 947 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 DOK1Q99704 481 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 C1QTNF5Q9BXJ0 243 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 ZNF442Q9H7R0 627 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 RMND5AQ9H871 391 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 MOV10Q9HCE1 1003 aaKnown RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 DDX28Q9NUL7 540 aaKnown RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 THAP1Q9NVV9 213 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 THUMPD1Q9NXG2 353 aaKnown RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 B3GAT1Q9P2W7 334 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 FBXO9Q9UK97 447 aaPredicted RBP8.38□□□□□ -1.07
USP39-212ENST00000465514 RCE1Q9Y256 329 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 IFT52Q9Y366 437 aa8.38□□□□□ -1.07
USP39-212ENST00000465514 IGHV2OR16-5A0A0B4J2B6 119 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 SH3PXD2BA1X283 911 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 ZNF503-AS2A6NEH8 195 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 BCL10O95999 233 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 PNPP00491 289 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 AVPP01185 164 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 ERCC1P07992 297 aaPredicted RBP8.37□□□□□ -1.07
USP39-212ENST00000465514 IFNGR1P15260 489 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 ARR3P36575 388 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 POLR2JP52435 117 aaKnown RBP8.37□□□□□ -1.07
USP39-212ENST00000465514 NPRL3Q12980 569 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 RIN1Q13671 783 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 RGNQ15493 299 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 CEACAM16Q2WEN9 425 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 SLC9B1Q4ZJI4 515 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 C6orf10Q5SRN2 563 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
USP39-212ENST00000465514 FAHD2BQ6P2I3 314 aaPredicted RBP8.37□□□□□ -1.07
USP39-212ENST00000465514 MSANTD1Q6ZTZ1 278 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 SPATA21Q7Z572 469 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 MDP1Q86V88 176 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 NEU4Q8WWR8 484 aaPredicted RBP8.37□□□□□ -1.07
USP39-212ENST00000465514 MAL2Q969L2 176 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 SLC35B4Q969S0 331 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 FAHD2AQ96GK7 314 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 ANKRD27Q96NW4 1050 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 OR2M2Q96R28 347 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 PARD6BQ9BYG5 372 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 NARFLQ9H6Q4 476 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 CRLF2Q9HC73 371 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 BCL2L10Q9HD36 194 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 SDR39U1Q9NRG7 319 aaPredicted RBP8.37□□□□□ -1.07
USP39-212ENST00000465514 ZIM2Q9NZV7 527 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 RPS6KB2Q9UBS0 482 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 PCDHB14Q9Y5E9 798 aa8.37□□□□□ -1.07
USP39-212ENST00000465514 M0R082 166 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 M0R3G1 203 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 CLIC1O00299 241 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 AIM2O14862 343 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 UBDO15205 165 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 OR2T1O43869 369 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 FZD7O75084 574 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 SEC14L2O76054 403 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 IGFBP1P08833 259 aaPredicted RBP8.36□□□□□ -1.07
USP39-212ENST00000465514 ADRA2AP08913 450 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 CBLP22681 906 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 GRPRP30550 384 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 CAPZA2P47755 286 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 IL13RA1P78552 427 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 IL1RL1Q01638 556 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 DAG1Q14118 895 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 ADRM1Q16186 407 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 PHYHD1Q5SRE7 291 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 FAM69AQ5T7M9 428 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 KRT80Q6KB66 452 aa8.36□□□□□ -1.07
USP39-212ENST00000465514 C6orf89Q6UWU4 347 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms