RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 FOXF2Q12947 444 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 FAM205BPQ63HN1 556 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 KDM4DQ6B0I6 523 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 XKRXQ6PP77 449 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 KLHL17Q6TDP4 642 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 SLC35D2Q76EJ3 337 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 CNEP1R1Q8N9A8 125 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 FANK1Q8TC84 345 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 EME1Q96AY2 570 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 STARD4Q96DR4 205 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 CIB1Q99828 191 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 OR52D1Q9H346 318 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 TXNIPQ9H3M7 391 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 PAPOLBQ9NRJ5 636 aaKnown RBP13.06□□□□□ -0.32
HLA-F-223ENST00000465459 PLSCR4Q9NRQ2 329 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 USE1Q9NZ43 259 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 REV1Q9UBZ9 1251 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 CLEC4AQ9UMR7 237 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 RNF6Q9Y252 685 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 DIDO1Q9BTC0 2240 aaKnown RBP13.06□□□□□ -0.32
HLA-F-223ENST00000465459 MYO18BQ8IUG5 2567 aa13.06□□□□□ -0.32
HLA-F-223ENST00000465459 INTS1Q8N201 2190 aaKnown RBP13.05□□□□□ -0.32
HLA-F-223ENST00000465459 CENPBD1B2RD01 187 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 IMPA2O14732 288 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 CASQ2O14958 399 aaPredicted RBP13.05□□□□□ -0.32
HLA-F-223ENST00000465459 ARPC3O15145 178 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 IDH3BO43837 385 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
HLA-F-223ENST00000465459 BCL10O95999 233 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 F13BP05160 661 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 OSMP13725 252 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 IFNGR1P15260 489 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 ZNF26P17031 533 aaPredicted RBP13.05□□□□□ -0.32
HLA-F-223ENST00000465459 RPL4P36578 427 aaKnown RBP13.05□□□□□ -0.32
HLA-F-223ENST00000465459 OR3A2P47893 321 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 FXYD6P3P58550 94 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 CTXN1P60606 82 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 ESRRGP62508 458 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 SLC34A1Q06495 639 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 SLC25A35Q3KQZ1 300 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 GPR139Q6DWJ6 353 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 AAED1Q7RTV5 226 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 OR52L1Q8NGH7 329 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 OR6X1Q8NH79 312 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 ZNF385AQ96PM9 386 aaKnown RBP13.05□□□□□ -0.32
HLA-F-223ENST00000465459 NRIP3Q9NQ35 241 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 KRT84Q9NSB2 600 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 BAIAP2Q9UQB8 552 aa13.05□□□□□ -0.32
HLA-F-223ENST00000465459 A6NIZ1 184 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ZNF726A6NNF4 738 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 MCIDASD6RGH6 385 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 PDLIM1O00151 329 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 MSTNO14793 375 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ZNF432O94892 652 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 CGAP01215 116 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 TP53P04637 393 aaPredicted RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ALPLP05186 524 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 IGFBP5P24593 272 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ALDH3A2P51648 485 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 RPS6KA3P51812 740 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 CLDN17P56750 224 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 RAP1BP61224 184 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 RPL27P61353 136 aaKnown RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 RAP1AP62834 184 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 SIRPAP78324 504 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 DAG1Q14118 895 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 TRIP10Q15642 601 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ACKR1Q16570 336 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ARMC4Q5T2S8 1044 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 THSD4Q6ZMP0 1018 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ZBTB49Q6ZSB9 765 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 NCCRP1Q6ZVX7 275 aaPredicted RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 NUFIP2Q7Z417 695 aaKnown RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 BTLAQ7Z6A9 289 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 MRGPRGQ86SM5 289 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 KIF18BQ86Y91 864 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 CCDC71Q8IV32 467 aaPredicted RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 CBR4Q8N4T8 237 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ZNF808Q8N4W9 903 aaPredicted RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 PACRGLQ8N7B6 248 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 POMGNT2Q8NAT1 580 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 LILRB4Q8NHJ6 448 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 APH1AQ96BI3 265 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 LRR1Q96L50 414 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 KATNB1Q9BVA0 655 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 POLDIP3Q9BY77 421 aaKnown RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 SMURF2Q9HAU4 748 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 TMEFF2Q9UIK5 374 aaPredicted RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 PROCRQ9UNN8 238 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 ORC6Q9Y5N6 252 aa13.04□□□□□ -0.32
HLA-F-223ENST00000465459 NCOA6Q14686 2063 aaPredicted RBP13.04□□□□□ -0.32
HLA-F-223ENST00000465459 SLC35F4A4IF30 521 aa13.03□□□□□ -0.32
HLA-F-223ENST00000465459 WIPF3A6NGB9 483 aa13.03□□□□□ -0.32
HLA-F-223ENST00000465459 EI24O14681 340 aa13.03□□□□□ -0.32
HLA-F-223ENST00000465459 AHCYL1O43865 530 aa13.03□□□□□ -0.32
HLA-F-223ENST00000465459 SLC43A1O75387 559 aa13.03□□□□□ -0.32
HLA-F-223ENST00000465459 SERPINI2O75830 405 aa13.03□□□□□ -0.32
HLA-F-223ENST00000465459 TXNDC12O95881 172 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms