RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 SGTBQ96EQ0 304 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 OXGR1Q96P68 337 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF347Q96SE7 839 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 MAGIXQ9H6Y5 334 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 FKRPQ9H9S5 495 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 MAN2C1Q9NTJ4 1040 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 MRPL39Q9NYK5 338 aaKnown RBP15.65■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF229Q9UJW7 825 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 POMPQ9Y244 141 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 FLVCR1Q9Y5Y0 555 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 ZANQ9Y493 2812 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 AQP12BA6NM10 295 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 IGF2P01344 180 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 HEXAP06865 529 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 THBDP07204 575 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 IFI30P13284 250 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 ZNF43P17038 809 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 FUT1P19526 365 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 OR3A2P47893 321 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 IQCCQ4KMZ1 466 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 FGD3Q5JSP0 725 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 TFAP2EQ6VUC0 442 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 Q71RC1 249 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-205ENST00000465238 AQP12AQ8IXF9 295 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 CDK20Q8IZL9 346 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 RNF113BQ8IZP6 322 aaKnown RBP15.64■□□□□ 0.09
COL7A1-205ENST00000465238 APH1AQ96BI3 265 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 COX4I2Q96KJ9 171 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 OR10A4Q9H209 315 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-205ENST00000465238 SLC7A8Q9UHI5 535 aa15.64■□□□□ 0.09
COL7A1-205ENST00000465238 A0A087WUU8 490 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-205ENST00000465238 A0A1W2PRQ8 180 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 MS4A18H0YCH9 400 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 KLF4O43474 513 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 OR7A10O76100 309 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 ADORA3P0DMS8 318 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 FUT4P22083 530 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 NR1H2P55055 460 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 SPIBQ01892 262 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 DGCR6Q14129 220 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 MS4A18Q3C1V0 323 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 CASP12Q6UXS9 341 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 MBOAT2Q6ZWT7 520 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 CREB3L2Q70SY1 520 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 AAED1Q7RTV5 226 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 PIWIL3Q7Z3Z3 882 aaKnown RBP15.63■□□□□ 0.09
COL7A1-205ENST00000465238 NANOGNBQ7Z5D8 188 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 SPATA24Q86W54 205 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 UEVLDQ8IX04 471 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 NRMQ8IXM6 262 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 LRRC17Q8N6Y2 441 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 TMEM45BQ96B21 275 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 BPIFA2Q96DR5 249 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 Q96MF0 132 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 BDH2Q9BUT1 245 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 C20orf141Q9NUB4 165 aa15.63■□□□□ 0.09
COL7A1-205ENST00000465238 FN1P02751 2386 aaKnown RBP15.63■□□□□ 0.09
COL7A1-205ENST00000465238 PRR14LQ5THK1 2151 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 LOC102725191A0A1B0GVB3 256 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PLPP3O14495 311 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PIP5K1CO60331 668 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 GADD45GO95257 159 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PSMB1P20618 241 aaKnown RBP15.62■□□□□ 0.09
COL7A1-205ENST00000465238 AHCYP23526 432 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PRKCDQ05655 676 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PUDPQ08623 228 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PODNL1Q6PEZ8 512 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 TBPL2Q6SJ96 375 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.62■□□□□ 0.09
COL7A1-205ENST00000465238 SLC46A3Q7Z3Q1 461 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 YTHDF3Q7Z739 585 aaKnown RBP15.62■□□□□ 0.09
COL7A1-205ENST00000465238 EPHX4Q8IUS5 362 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 UBE2J2Q8N2K1 259 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 ZIC4Q8N9L1 334 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 OR52J3Q8NH60 311 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 SLC7A13Q8TCU3 470 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PERPQ96FX8 193 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 ZNF385AQ96PM9 386 aaKnown RBP15.62■□□□□ 0.09
COL7A1-205ENST00000465238 GSX2Q9BZM3 304 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 PRSS50Q9UI38 385 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 AURKCQ9UQB9 309 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 GPR52Q9Y2T5 361 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 NOX1Q9Y5S8 564 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 JMJD1CQ15652 2540 aa15.62■□□□□ 0.09
COL7A1-205ENST00000465238 DHRS12A0PJE2 317 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 BLOC1S5-TXNDC5H3BN57 136 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 H7C1Q1 480 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 AKAP8O43823 692 aaKnown RBP15.61■□□□□ 0.09
COL7A1-205ENST00000465238 HPRP00739 348 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 ASAH2BP0C7U1 165 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 RAP2AP10114 183 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 HOXB6P17509 224 aaKnown RBP15.61■□□□□ 0.09
COL7A1-205ENST00000465238 RRM2P31350 389 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 NTF4P34130 210 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 CLDN17P56750 224 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 LSM11P83369 360 aaKnown RBP eCLIP15.61■□□□□ 0.098e-7■■■■■ 32.6
COL7A1-205ENST00000465238 ZP4Q12836 540 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 ZNF704Q6ZNC4 412 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms