RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 BANF1O75531 89 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 WISP2O76076 250 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 TNFSF15O95150 251 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 GOT2P00505 430 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 APRTP07741 180 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 F3P13726 295 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 HNF1AP20823 631 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 MSNP26038 577 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 PDHA2P29803 388 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 FOXN2P32314 431 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 FDFT1P37268 417 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 FNTAP49354 379 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 LIMK2P53671 638 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 GFERP55789 205 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 BASP1P80723 227 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 MRPS25P82663 173 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 SLC3A1Q07837 685 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 TGM3Q08188 693 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 RASGEF1BQ0VAM2 473 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CCDC173Q0VFZ6 552 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 BST1Q10588 318 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CDH17Q12864 832 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 SELPLGQ14242 412 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 TGIF1Q15583 401 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 SSX2Q16385 188 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 EXOC3L2Q2M3D2 409 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 ZNF658BQ4V348 819 aaPredicted RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 GRTP1Q5TC63 336 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CARD17Q5XLA6 110 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 KLC3Q6P597 504 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CBLN3Q6UW01 205 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 SYT10Q6XYQ8 523 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CERS6Q6ZMG9 384 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CDHR3Q6ZTQ4 885 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 YRDCQ86U90 279 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 BIVMQ86UB2 503 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 SERPINA9Q86WD7 417 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CDC20BQ86Y33 519 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 DNAAF3Q8N9W5 541 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 SMYD1Q8NB12 490 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 WDR36Q8NI36 951 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 TRMT10AQ8TBZ6 339 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 SUN5Q8TC36 379 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 LKAAEAR1Q8TD35 194 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 DTX3LQ8TDB6 740 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 DNAJA4Q8WW22 397 aaPredicted RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 ANP32BQ92688 251 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 MCHR2Q969V1 340 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 MAGOHBQ96A72 148 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 C19orf60Q96EN9 201 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 FAM71F1Q96KD3 344 aaPredicted RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 C18orf12Q96KH6 178 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CAPZA3Q96KX2 299 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 GPR137Q96N19 417 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 ZNF300Q96RE9 604 aaPredicted RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 CTRCQ99895 268 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 PSD2Q9BQI7 771 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 SLC39A3Q9BRY0 314 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 TIMM29Q9BSF4 260 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 WWP1Q9H0M0 922 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 MAGT1Q9H0U3 335 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 CHRAC1Q9NRG0 131 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 NLE1Q9NVX2 485 aaPredicted RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 SMOXQ9NWM0 555 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 PTTG2Q9NZH5 202 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 SPATA7Q9P0W8 599 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 PISDQ9UG56 409 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 FOXJ3Q9UPW0 622 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 TMED7Q9Y3B3 224 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 TMED3Q9Y3Q3 217 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 ZNF106Q9H2Y7 1883 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 MGAQ8IWI9 3026 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 AHCTF1Q8WYP5 2266 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 PTPRQQ9UMZ3 2332 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 TRAV18A0A075B6X5 111 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 FAM240BA0A1B0GVZ2 78 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 MGAT4DA6NG13 374 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 C15orf62A8K5M9 175 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 TMEM178BH3BS89 294 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 GOLGA8MH3BSY2 632 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 SDHDO14521 159 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 NVLO15381 856 aaKnown RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 ZNF264O43296 627 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 OTCP00480 354 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 KRT14P02533 472 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 CAPN1P07384 714 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 PABPC4LP0CB38 370 aaKnown RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 UBTFL6P0CB48 400 aaPredicted RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 THRAP10827 490 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 ATP1B2P14415 290 aaPredicted RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 ZNF44P15621 663 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 XRCC1P18887 633 aaPredicted RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 IDSP22304 550 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 NUP62P37198 522 aaPredicted RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 COILP38432 576 aaPredicted RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 LEPRP48357 1165 aaKnown RBP3.61□□□□□ -1.83
UBR4-209ENST00000465036 PRLHRP49683 370 aa3.61□□□□□ -1.83
UBR4-209ENST00000465036 TNFSF10P50591 281 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms