RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 OR2M2Q96R28 347 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 DENND2DQ9H6A0 471 aaPredicted RBP12.38□□□□□ -0.43
SMC1A-204ENST00000463684 ARMC7Q9H6L4 198 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 B3GAT2Q9NPZ5 323 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF232Q9UNY5 417 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 POFUT2Q9Y2G5 429 aa12.38□□□□□ -0.43
SMC1A-204ENST00000463684 CCDC154A6NI56 674 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 AIM2O14862 343 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 OR2T1O43869 369 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 C1QCP02747 245 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 MAGEB1P43366 347 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
SMC1A-204ENST00000463684 RAB1AP62820 205 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 CCL8P80075 99 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 LARS2Q15031 903 aaKnown RBP12.37□□□□□ -0.43
SMC1A-204ENST00000463684 CHI3L2Q15782 390 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 FXNQ16595 210 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 PCGF3Q3KNV8 242 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 SPANXN4Q5MJ08 99 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 CARD17Q5XLA6 110 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF813Q6ZN06 617 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF836Q6ZNA1 936 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF621Q6ZSS3 439 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 SNX32Q86XE0 403 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 EPS8L3Q8TE67 593 aaKnown RBP12.37□□□□□ -0.43
SMC1A-204ENST00000463684 SNX33Q8WV41 574 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 PPP1R36Q96LQ0 422 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 CCDC115Q96NT0 180 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 PANX1Q96RD7 426 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 AKTIPQ9H8T0 292 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 UNKLQ9H9P5 680 aaKnown RBP12.37□□□□□ -0.43
SMC1A-204ENST00000463684 CACYBPQ9HB71 228 aaKnown RBP12.37□□□□□ -0.43
SMC1A-204ENST00000463684 HINT3Q9NQE9 182 aaKnown RBP12.37□□□□□ -0.43
SMC1A-204ENST00000463684 MKS1Q9NXB0 559 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 CALML5Q9NZT1 146 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 TAAR3PQ9P1P4 343 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 B3GAT1Q9P2W7 334 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 SLC7A8Q9UHI5 535 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 BTNL2Q9UIR0 455 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 FBXL3Q9UKT7 428 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 DSPPQ9NZW4 1301 aa12.37□□□□□ -0.43
SMC1A-204ENST00000463684 POM121CA8CG34 1229 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 TPD52L2O43399 206 aaKnown RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 DEAF1O75398 565 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 PRG2P13727 222 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 PRTN3P24158 256 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 ARRB2P32121 409 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 CRYBB2P43320 205 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 GIPRP48546 466 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 RGS7BPQ6MZT1 257 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 H1FNTQ75WM6 255 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 RETREG3Q86VR2 466 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 TMEM123Q8N131 208 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 SIGLECL1Q8N7X8 197 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 KTI12Q96EK9 354 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 TIMD4Q96H15 378 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 LRR1Q96L50 414 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 C16orf45Q96MC5 204 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF75AQ96N20 296 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 PTDSS2Q9BVG9 487 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 ZMAT3Q9HA38 289 aaKnown RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 DECR2Q9NUI1 292 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 SLC17A7Q9P2U7 560 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF443Q9Y2A4 671 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-204ENST00000463684 IGHV1-69-2A0A0G2JMI3 117 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 LOC102725191A0A1B0GVB3 256 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 SLC22A23A1A5C7 686 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 CLDN25C9JDP6 229 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 E9PBE3 544 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 M0R082 166 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 UBL3O95164 117 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 IGHV2-5P01817 119 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 NUDT17P0C025 328 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 AQP5P55064 265 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 IL13RA1P78552 427 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 EGR4Q05215 589 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 COX20Q5RI15 118 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 FAM69AQ5T7M9 428 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 RNF220Q5VTB9 566 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 NET1Q7Z628 596 aaPredicted RBP12.35□□□□□ -0.43
SMC1A-204ENST00000463684 UEVLDQ8IX04 471 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 CLIP4Q8N3C7 705 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF417Q8TAU3 575 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 PNPT1Q8TCS8 783 aaKnown RBP12.35□□□□□ -0.43
SMC1A-204ENST00000463684 RAB1CQ92928 201 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 ZNF587Q96SQ5 575 aaPredicted RBP12.35□□□□□ -0.43
SMC1A-204ENST00000463684 GPA33Q99795 319 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 SLCO1C1Q9NYB5 712 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 P2RX2Q9UBL9 471 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 RPS6KB2Q9UBS0 482 aa12.35□□□□□ -0.43
SMC1A-204ENST00000463684 TLDC2A0PJX2 215 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 KRT75O95678 551 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms